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Sequence alignment

Assessing the Effects of Symmetry on Motif Discovery and Modeling

Lala M. Motlhabi, Gary D. Stormo

Rapid Genotyping of Soybean Cultivars Using High Throughput Sequencing

Kranthi Varala, Kankshita Swaminathan, Ying Li, Matthew E. Hudson

Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains

Jinzhong Lin, Liman Zhang, Shaomei Lai, Keqiong Ye

First Transcriptome of the Testis-Vas Deferens-Male Accessory Gland and Proteome of the Spermatophore from Dermacentor variabilis (Acari: Ixodidae)

Daniel E. Sonenshine, Brooke W. Bissinger, [ ... ], R. Michael Roe

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

Vincent Ranwez, Sébastien Harispe, Frédéric Delsuc, Emmanuel J. P. Douzery

Tidying Up International Nucleotide Sequence Databases: Ecological, Geographical and Sequence Quality Annotation of ITS Sequences of Mycorrhizal Fungi

Leho Tedersoo, Kessy Abarenkov, [ ... ], Urmas Kõljalg

The Human N-Alpha-Acetyltransferase 40 (hNaa40p/hNatD) Is Conserved from Yeast and N-Terminally Acetylates Histones H2A and H4

Kristine Hole, Petra Van Damme, [ ... ], Thomas Arnesen

Analysis of the Complete Open Reading Frame of Genotype 2b Hepatitis C Virus in Association with the Response to Peginterferon and Ribavirin Therapy

Makoto Kadokura, Shinya Maekawa, [ ... ], Nobuyuki Enomoto

Comparative Analysis of Serine/Arginine-Rich Proteins across 27 Eukaryotes: Insights into Sub-Family Classification and Extent of Alternative Splicing

Dale N. Richardson, Mark F. Rogers, [ ... ], Anireddy S. N. Reddy

A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade

Björn Brindefalk, Thijs J. G. Ettema, [ ... ], Siv G. E. Andersson

Origination of New Immunological Functions in the Costimulatory Molecule B7-H3: The Role of Exon Duplication in Evolution of the Immune System

Jing Sun, Fengqing Fu, [ ... ], Xueguang Zhang

Phylogenetic Relationships of the Marine Haplosclerida (Phylum Porifera) Employing Ribosomal (28S rRNA) and Mitochondrial (cox1, nad1) Gene Sequence Data

Niamh E. Redmond, Jean Raleigh, [ ... ], Grace P. McCormack

AMD, an Automated Motif Discovery Tool Using Stepwise Refinement of Gapped Consensuses

Jiantao Shi, Wentao Yang, [ ... ], Kankan Wang

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