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RNA structure

Structural analysis of viral ExoN domains reveals polyphyletic hijacking events

Adrián Cruz-González, Israel Muñoz-Velasco, Wolfgang Cottom-Salas, Arturo Becerra, José A. Campillo-Balderas, Ricardo Hernández-Morales, Alberto Vázquez-Salazar, Rodrigo Jácome, Antonio Lazcano

published 17 Mar 2021

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Analysis of small and large subunit rDNA introns from several ectomycorrhizal fungi species

Li-hong Chen, Wei Yan, Ting Wang, Yu Wang, Jian Liu, Zhuo Yu

published 15 Mar 2021

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An apta-aggregation based machine learning assay for rapid quantification of lysozyme through texture parameters

Manoharan Sanjay, Kumar Gaurav, Maria Jesus Gonzalez-Pabon, Julio Fuchs, Susan R. Mikkelsen, Eduardo Cortón

published 08 Mar 2021

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Genetic impacts on thermostability of onco-lncRNA HOTAIR during the development and progression of endometriosis

Cherry Yin-Yi Chang, Chung-Chen Tseng, Ming-Tsung Lai, An-Jen Chiang, Lun-Chien Lo, Chih-Mei Chen, Man-Ju Yen, Li Sun, Li Yang, Tritium Hwang, Fuu-Jen Tsai, Jim Jinn-Chyuan Sheu

published 05 Mar 2021

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Identification of RNA pseudouridine sites using deep learning approaches

Abu Zahid Bin Aziz, Md. Al Mehedi Hasan, Jungpil Shin

published 23 Feb 2021

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Cyp33 binds AU-rich RNA motifs via an extended interface that competitively disrupts the gene repressive Cyp33-MLL1 interaction in vitro

Neil R. Lloyd, Deborah S. Wuttke

published 19 Feb 2021

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Generalized linear models provide a measure of virulence for specific mutations in SARS-CoV-2 strains

Anastasis Oulas, Maria Zanti, Marios Tomazou, Margarita Zachariou, George Minadakis, Marilena M. Bourdakou, Pavlos Pavlidis, George M. Spyrou

published 26 Jan 2021

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PFRED: A computational platform for siRNA and antisense oligonucleotides design

Simone Sciabola, Hualin Xi, Dario Cruz, Qing Cao, Christine Lawrence, Tianhong Zhang, Sergio Rotstein, Jason D. Hughes, Daniel R. Caffrey, Robert V. Stanton

published 22 Jan 2021

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rfaRm: An R client-side interface to facilitate the analysis of the Rfam database of RNA families

Lara Sellés Vidal, Rafael Ayala, Guy-Bart Stan, Rodrigo Ledesma-Amaro

published 15 Jan 2021

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miRNA expression profiling and zeatin dynamic changes in a new model system of in vivo indirect regeneration of tomato

Huiying Cao, Xinyue Zhang, Yanye Ruan, Lijun Zhang, Zhenhai Cui, Xuxiao Li, Bing Jia

published 17 Dec 2020

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Requirements for efficient ligand-gated co-transcriptional switching in designed variants of the B. subtilis pbuE adenine-responsive riboswitch in E. coli

Lea K. Drogalis, Robert T. Batey

published 01 Dec 2020

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Unraveling the mechanism of recognition of the 3’ splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60

Hsin-hao T. Hsiao, Gregg V. Crichlow, James W. Murphy, Ewa J. Folta-Stogniew, Elias J. Lolis, Demetrios T. Braddock

published 30 Nov 2020

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RNA-hydrolyzing activity of metallo-β-lactamase IMP-1

Yoshiki Kato, Masayuki Takahashi, Mineaki Seki, Masayuki Nashimoto, Akiko Shimizu-Ibuka

published 30 Oct 2020

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