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RNA stem-loop structure

A novel viral RNA detection method based on the combined use of trans-acting ribozymes and HCR-FRET analyses

Leonardo Ferreira da Silva, Aisel Valle Garay, Pedro Felipe Queiroz, Sophia Garcia de Resende, Mayna Gomide, Izadora Cristina Moreira de Oliveira, Amanda Souza Bernasol, Anibal Arce, Liem Canet Santos, Fernando Torres, Ildinete Silva-Pereira, Sonia Maria de Freitas, Cíntia Marques Coelho

published 26 Sep 2024

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Peptide nucleic acids can form hairpins and bind RNA-binding proteins

Yichen Zhong, Lorna Wilkinson-White, Esther Zhang, Biswaranjan Mohanty, Belinda B. Zhang, Madeline S. McRae, Rachel Luo, Thomas A. Allport, Anthony P. Duff, Jennifer Zhao, Serene El-Kamand, Mar-Dean Du Plessis, Liza Cubeddu, Roland Gamsjaeger, Sandro F. Ataide, Ann H. Kwan

published 16 Sep 2024

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Possible involvement of three-stemmed pseudoknots in regulating translational initiation in human mRNAs

Xiaolan Huang, Zhihua Du

published 22 Jul 2024

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The PCI domains are “winged” HEAT domains

Eleanor Elise Paul, Assen Marintchev

published 12 Sep 2022

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Mapping of sequences in the 5’ region and 3’ UTR of tomato ringspot virus RNA2 that facilitate cap-independent translation of reporter transcripts in vitro

Dinesh Babu Paudel, Hélène Sanfaçon

published 09 Apr 2021

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The RNA encoding the microtubule-associated protein tau has extensive structure that affects its biology

Jonathan L. Chen, Walter N. Moss, Adam Spencer, Peiyuan Zhang, Jessica L. Childs-Disney, Matthew D. Disney

published 10 Jul 2019

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Prediction of binding property of RNA-binding proteins using multi-sized filters and multi-modal deep convolutional neural network

Taesu Chung, Dongsup Kim

published 26 Apr 2019

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Specific interaction of zinc finger protein Com with RNA and the crystal structure of a self-complementary RNA duplex recognized by Com

Martyna Nowacka, Humberto Fernandes, Agnieszka Kiliszek, Agata Bernat, Grzegorz Lach, Janusz M. Bujnicki

published 25 Apr 2019

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BtsCI and BseGI display sequence preference in the nucleotides flanking the recognition sequence

João Rosa, Esther Fernandez-Gonzalez, Cosimo Ducani, Björn Högberg

published 17 Aug 2018

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Identification and expression analysis of a microRNA cluster derived from pre-ribosomal RNA in Papaver somniferum L. and Papaver bracteatum L.

Farshad Davoodi Mastakani, Gabriel Pagheh, Sajad Rashidi Monfared, Masoud Shams-Bakhsh

published 01 Aug 2018

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RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model

Hosna Jabbari, Ian Wark, Carlo Montemagno

published 05 Apr 2018

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Full-length genome sequences of porcine epidemic diarrhoea virus strain CV777; Use of NGS to analyse genomic and sub-genomic RNAs

Thomas Bruun Rasmussen, Maria Beatrice Boniotti, Alice Papetti, Béatrice Grasland, Jean-Pierre Frossard, Akbar Dastjerdi, Marcel Hulst, Dennis Hanke, Anne Pohlmann, Sandra Blome, Wim H. M. van der Poel, Falko Steinbach, Yannick Blanchard, Antonio Lavazza, Anette Bøtner, Graham J. Belsham

published 01 Mar 2018

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The soluble loop BC region guides, but not dictates, the assembly of the transmembrane cytochrome b₆

Lydia Tome-Stangl, Cornelia Schaetzel, Stefan Tenzer, Frank Bernhard, Dirk Schneider

published 14 Dec 2017

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