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RNA sequencing

Improved Annotation of 3′ Untranslated Regions and Complex Loci by Combination of Strand-Specific Direct RNA Sequencing, RNA-Seq and ESTs

Nicholas J. Schurch, Christian Cole, [ ... ], Geoffrey J. Barton

Transcriptome Analysis of the Portunus trituberculatus: De Novo Assembly, Growth-Related Gene Identification and Marker Discovery

Jianjian Lv, Ping Liu, [ ... ], Jian Li

RNAthermsw: Direct Temperature Simulations for Predicting the Location of RNA Thermometers

Alexander Churkin, Assaf Avihoo, Michal Shapira, Danny Barash

Analysis of miRNAs and Their Targets during Adventitious Shoot Organogenesis of Acacia crassicarpa

Weina Liu, Wangning Yu, [ ... ], Xiangming Xie

ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells

Lin Jiang, Ola Wallerman, [ ... ], Leif Andersson

Characterization of the Miiuy Croaker (Miichthys miiuy) Transcriptome and Development of Immune-Relevant Genes and Molecular Markers

Rongbo Che, Yueyan Sun, Dianqiao Sun, Tianjun Xu

A Model-Based Approach to Identify Binding Sites in CLIP-Seq Data

Tao Wang, Beibei Chen, [ ... ], Guanghua Xiao

Deep Profiling of the Novel Intermediate-Size Noncoding RNAs in Intraerythrocytic Plasmodium falciparum

Chunyan Wei, Tengfei Xiao, [ ... ], Heng Wang

Transcriptome Sequencing and Gene Expression Analysis of Trichoderma brevicompactum under Different Culture Conditions

Xu-Ping Shentu, Wei-Ping Liu, [ ... ], Chuan-Xi Zhang

TraV: A Genome Context Sensitive Transcriptome Browser

Sascha Dietrich, Sandra Wiegand, Heiko Liesegang

Deep Sequencing to Identify the Causes of Viral Encephalitis

Benjamin K. Chan, Theodore Wilson, Kael F. Fischer, John D. Kriesel

Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing

Myung-Chul Kim, Seung-Woo Lee, [ ... ], Yongbaek Kim

Identification and Comparative Analysis of the Tegillarca granosa Haemocytes MicroRNA Transcriptome in Response to Cd Using a Deep Sequencing Approach

Yongbo Bao, Lili Zhang, Yinghui Dong, Zhihua Lin

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