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RNA processing

Whole Transcriptome Sequencing Reveals Gene Expression and Splicing Differences in Brain Regions Affected by Alzheimer's Disease

Natalie A. Twine, Karolina Janitz, Marc R. Wilkins, Michal Janitz

diffReps: Detecting Differential Chromatin Modification Sites from ChIP-seq Data with Biological Replicates

Li Shen, Ning-Yi Shao, [ ... ], Eric J. Nestler

A Pan-Cancer Analysis of Transcriptome Changes Associated with Somatic Mutations in U2AF1 Reveals Commonly Altered Splicing Events

Angela N. Brooks, Peter S. Choi, [ ... ], Matthew Meyerson

A Highly Functional Synthetic Phage Display Library Containing over 40 Billion Human Antibody Clones

Marcel Weber, Emil Bujak, [ ... ], Dario Neri

Divergent Effects of PERK and IRE1 Signaling on Cell Viability

Jonathan H. Lin, Han Li, [ ... ], Peter Walter

IRE1/bZIP60-Mediated Unfolded Protein Response Plays Distinct Roles in Plant Immunity and Abiotic Stress Responses

Adrian A. Moreno, M. Shahid Mukhtar, [ ... ], Karolina M. Pajerowska-Mukhtar

Transcriptome Profiling of the Cancer, Adjacent Non-Tumor and Distant Normal Tissues from a Colorectal Cancer Patient by Deep Sequencing

Yan'an Wu, Xuetao Wang, [ ... ], Yi Huang

RNA-Seq Analysis of Differential Splice Junction Usage and Intron Retentions by DEXSeq

Yafang Li, Xiayu Rao, [ ... ], Bin Liu

Detection of VEGF-A_xxxb Isoforms in Human Tissues

David O. Bates, Athina Mavrou, [ ... ], Steven J. Harper

Alternative Promoters Influence Alternative Splicing at the Genomic Level

Dedong Xin, Landian Hu, Xiangyin Kong

Evaluating Characteristics of De Novo Assembly Software on 454 Transcriptome Data: A Simulation Approach

Marvin Mundry, Erich Bornberg-Bauer, Michael Sammeth, Philine G. D. Feulner

NeuN/Rbfox3 Nuclear and Cytoplasmic Isoforms Differentially Regulate Alternative Splicing and Nonsense-Mediated Decay of Rbfox2

B. Kate Dredge, Kirk B. Jensen

Histone Deacetylase Activity Modulates Alternative Splicing

Jarmila Hnilicová, Samira Hozeifi, [ ... ], David Staněk

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