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RNA analysis

Borax-based gel electrophoresis: A novel approach for RNA integrity analysis

Abdulhadi Albaser

published 27 Feb 2026

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A gene-specific RNA enrichment protocol for nanopore direct-RNA sequencing

Maja Bele Dyrendalsli, Cecilie Løkke, Christer Einvik

published 11 Feb 2026

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Comparing RNA extraction protocols from formalin-fixed paraffin-embedded microcore samples

Maxime Golias, Zuzana Krupova, Pierre Defrenaix, Marie-Françoise Heymann, Dominique Heymann

published 08 Dec 2025

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Infiltration of CXCL9+ macrophages confers a favorable prognosis in breast cancer: Insights from an integrated single-cell RNA and bulk RNA sequencing study

Bin Liang, Zhicai Duan, Siyu Long, Peng Zhou

published 01 Dec 2025

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A study of RNA splicing and protein expression in the living human brain

Brian H. Kopell, Deepak A. Kaji, Lora E. Liharska, Eric Vornholt, Anina Lund, Alice Hashemi, Ryan C. Thompson, Jessica S. Johnson, Nicole Bussola, Esther Cheng, You Jeong Park, Punit Shah, Weiping Ma, Richard Searfoss, Gregory M. Miller, Nischal Mahaveer Chand, Jack Humphrey, Lillian Wilkins, Kimia Ziafat, Hannah Silk, Lisa M. Linares, Brendan Sullivan, Claudia Feng, Vanessa Cohen, Prashant Kota, Emily Moya, Marysia-Kolbe Rieder, Girish N. Nadkarni, Michael S. Breen, Joseph Scarpa, Niven R. Narain, Pei Wang, Michael A. Kiebish, Eric E. Schadt, Noam D. Beckmann, Alexander W. Charney

published 09 Oct 2025

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Exploratory trajectory inference reveals convergent lineages for CD8 T cells in chronic LCMV infection

Jan T. Schleicher, Revant Gupta, Dario Cerletti, Ioana Sandu, Annette Oxenius, Manfred Claassen

published 19 Sep 2025

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Cleavage of MALAT1 RNA by 14-nt sgRNA-guided tRNase Z^L

Masayuki Takahashi, Masayuki Nashimoto

published 18 Sep 2025

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Analytical validation (accuracy, reproducibility, limit of detection) and gene expression analysis of FoundationOneRNA assay for fusion detection in 189 clinical tumor specimens

Daokun Sun, Richard S. P. Huang, Michelle Green, Chenming Cui, Saumya D. Sisoudiya, Andrej Savol, Chang Xu, Cui Guo, Joel Skoletsky, Justin M. Allen, Khaled Tolba, Varun Pattani, Alyssa Tarzia, Jennifer Whiting, Yanhua Tang, Lee A. Albacker, Christine Vietz, Michael Datto, Jie He, William Richard Jeck

published 12 Sep 2025

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Exosomal miRNA expression profiling in patients with imatinib resistant Chronic myeloid leukemia: A pilot study

Raphatphorn Navakanitworakul, Pirun Saelue, Tipparat Penglong, Piyatida Molika, Natakorn Nokchan, Natta Tansila, Hansuk Buncherd, Supinya Thanapongpichat, Kanitta Srinoun

published 29 Aug 2025

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Reliable RNA-seq analysis from FFPE specimens as a means to accelerate cancer-related health disparities research

Mitchell J. Frederick, Dannelys Perez-Bello, Pedram Yadollahi, Patricia Castro, Alan Frederick, Andrew Frederick, Rashid A. Osman, Fonma Essien, Imelda Yebra, Ashley Hamlin, Thomas J. Ow, Heath D. Skinner, Vlad C. Sandulache

published 21 Apr 2025

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mRNA extracted from frozen buffy coat samples stored long term in tubes with no RNA preservative shows promise for downstream sequencing analyses

Erik Bovinder Ylitalo, Linda Vidman, Sophia Harlid, Bethany Van Guelpen

published 19 Mar 2025

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Identification of novel antiviral host factors by functional gene expression analysis using in vitro HBV infection assay systems

Takuto Nosaka, Tatsushi Naito, Yu Akazawa, Kazuto Takahashi, Hidetaka Matsuda, Masahiro Ohtani, Tsutomu Nishizawa, Hiroaki Okamoto, Yasunari Nakamoto

published 06 Mar 2025

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Computational analysis of the effect of a binding protein (RbpA) on the dynamics of Mycobacterium tuberculosis RNA polymerase assembly

Sneha Bheemireddy, Ramanathan Sowdhamini, Narayanaswamy Srinivasan

published 30 Jan 2025

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