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Proteomics

Critical node detection in temporal social networks, based on global and semi-local centrality measures

Zahra Farahi, Rooholah Abedian, Luis E. C. Rocha, Ali Kamandi

published 26 Aug 2025

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Integrative molecular network analysis of genetic risk factors to infer biomarkers and therapeutic targets for rheumatoid arthritis

Sakhaa Alsaedi, Katsuhiko Mineta, Naoto Tamura, Xin Gao, Takashi Gojobori, Michihiro Ogasawara

published 21 Aug 2025

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Integrated gene network analysis and experimental validation identify key hub genes in potato response to Potato Virus Y infection

Roya Karimipour, Davoud Koolivand, Abozar Ghorbani, Masoud Naderpour, Mahsa Rostami

published 14 Aug 2025

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Comparative proteomics of HepG2 cells reveals NGLY1 as an important regulator of ferroptosis resistance and iron uptake

Stuart Emmerson, Haruhiko Fujihira, Takehiro Suzuki, Naoshi Dohmae, Peter Greimel, Yoshio Hirabayashi, Tadashi Suzuki

published 14 Aug 2025

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Influential node identification method based on multi-order neighbors and exclusive neighborhood

Feifei Wang, Zejun Sun, Guan Wang, Bohan Sun

published 13 Aug 2025

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Multi-Omics insights into the molecular mechanisms of trochlear dysplasia: A proteomic and metabolomic study in rats

Zhenhui Huo, Huijun Kang, Peishuo Liu, Yanshuo Li, Yingzhen Niu, Kuo Hao, Chongyi Fan, Fei Wang, Wei Lin

published 11 Aug 2025

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Evaluation of the gastrotolerability of ketoprofen, lysine, and gabapentin co-crystal administration in an in vitro model of gastric epithelium: a proteomic update

Francesco D’Egidio, Laura Brandolini, Vanessa Castelli, Massimiliano Quintiliani, Andrea Aramini, Annamaria Cimini, Marcello Allegretti, Michele d’Angelo

published 29 Jul 2025

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Recombinant human alpha-N-acetylglucosamine-6-sulfatase delivered to Sanfilippo D mice with repeated intracerebroventricular injections corrects CNS pathology

Grant L. Austin, Feng Wang, Steven Q. Le, Alexander Sorensen, Shan Li, Lai C. Foong, Srikanth Singamsetty, Jill Wood, Tsui-Fen Chou, Patricia I. Dickson

published 25 Jul 2025

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Comprehensive characterization of the competitive endogenous RNA network revealing its immune-related functions in hepatic ischemia-reperfusion injury

Lirong Liu, Qi Wang, Shuang Qin, Chang Su, Xin Hai, Zhenkuan Yuan

published 24 Jul 2025

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Integrated bioinformatics and experimental validation identify ATF3 as a key gene in secondary brain damage after intracerebral hemorrhage

Tao Cui, Jinbang Huang, Chaoyong Zhang, Bin Wang

published 18 Jul 2025

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Proteomic insights into broiler stress responses to LED lighting: Effects on liver proteome under neutral, cool, and warm spectra

Alessio Di Luca, Andrea Ianni, Francesca Bennato, Camillo Martino, Michael Henry, Paula Meleady, Giuseppe Martino

published 15 Jul 2025

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Tracing the function expansion for a primordial protein fold in the era of fold-based function prediction: β-trefoil

Moushmi Goswami, Subhashini Srinivasan

published 03 Jul 2025

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Protein-protein interaction prediction using bidirectional GRUs with explicit ensemble

Qiuhong Lan, Zhongtuan Zheng, Zhen Tang, Xuehua Qiu, Zhixiang Yin

published 02 Jul 2025

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