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Proteomics

The PyRosetta Toolkit: A Graphical User Interface for the Rosetta Software Suite

Jared Adolf-Bryfogle, Roland L. Dunbrack Jr.

MIDER: Network Inference with Mutual Information Distance and Entropy Reduction

Alejandro F. Villaverde, John Ross, Federico Morán, Julio R. Banga

Prediction and Validation of Gene-Disease Associations Using Methods Inspired by Social Network Analyses

U. Martin Singh-Blom, Nagarajan Natarajan, [ ... ], Edward M. Marcotte

An Inducible System for Rapid Degradation of Specific Cellular Proteins Using Proteasome Adaptors

Shameika R. Wilmington, Andreas Matouschek

NAViGaTing the Micronome – Using Multiple MicroRNA Prediction Databases to Identify Signalling Pathway-Associated MicroRNAs

Elize A. Shirdel, Wing Xie, Tak W. Mak, Igor Jurisica

Schizophrenia Gene Networks and Pathways and Their Applications for Novel Candidate Gene Selection

Jingchun Sun, Peilin Jia, [ ... ], Zhongming Zhao

Identifying Hubs in Protein Interaction Networks

Ravishankar R. Vallabhajosyula, Deboki Chakravarti, [ ... ], Alpan Raval

Functional Dissection of the TBK1 Molecular Network

Adriana Goncalves, Tilmann Bürckstümmer, [ ... ], Giulio Superti-Furga

A Network Pharmacology Approach to Understanding the Mechanisms of Action of Traditional Medicine: Bushenhuoxue Formula for Treatment of Chronic Kidney Disease

Shao-hua Shi, Yue-piao Cai, [ ... ], Zheng Xiang

Discovery and Preclinical Validation of Salivary Transcriptomic and Proteomic Biomarkers for the Non-Invasive Detection of Breast Cancer

Lei Zhang, Hua Xiao, [ ... ], David T. Wong

A modified FASP protocol for high-throughput preparation of protein samples for mass spectrometry

Jeremy Potriquet, Marut Laohaviroj, Jeffrey M. Bethony, Jason Mulvenna

Functional annotation of hypothetical proteins from the Exiguobacterium antarcticum strain B7 reveals proteins involved in adaptation to extreme environments, including high arsenic resistance

Wana Lailan Oliveira da Costa, Carlos Leonardo de Aragão Araújo, [ ... ], Adriana Ribeiro Carneiro Folador

Charting the NF-κB Pathway Interactome Map

Paolo Tieri, Alberto Termanini, [ ... ], Claudio Franceschi

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