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Proteomics

Proteomic and Phospho-Proteomic Profile of Human Platelets in Basal, Resting State: Insights into Integrin Signaling

Amir H. Qureshi, Vineet Chaoji, [ ... ], Vineet Gupta

Assessment of Metabolome Annotation Quality: A Method for Evaluating the False Discovery Rate of Elemental Composition Searches

Fumio Matsuda, Yoko Shinbo, [ ... ], Kazuki Saito

Empirical Bayes Analysis of Quantitative Proteomics Experiments

Adam A. Margolin, Shao-En Ong, [ ... ], Todd R. Golub

Determining Protein Complex Connectivity Using a Probabilistic Deletion Network Derived from Quantitative Proteomics

Mihaela E. Sardiu, Joshua M. Gilmore, [ ... ], Michael P. Washburn

Detection of Molecular Paths Associated with Insulitis and Type 1 Diabetes in Non-Obese Diabetic Mouse

Erno Lindfors, Peddinti V. Gopalacharyulu, Eran Halperin, Matej Orešič

Systems Integration of Biodefense Omics Data for Analysis of Pathogen-Host Interactions and Identification of Potential Targets

Peter B. McGarvey, Hongzhan Huang, [ ... ], Cathy H. Wu

Beyond Element-Wise Interactions: Identifying Complex Interactions in Biological Processes

Christophe Ladroue, Shuixia Guo, Keith Kendrick, Jianfeng Feng

Proteomic Interrogation of Androgen Action in Prostate Cancer Cells Reveals Roles of Aminoacyl tRNA Synthetases

Adaikkalam Vellaichamy, Arun Sreekumar, [ ... ], Alexey I. Nesvizhskii

Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

Jiangning Song, Hao Tan, [ ... ], James C. Whisstock

Comparative Proteomic Analysis of the PhoP Regulon in Salmonella enterica Serovar Typhi Versus Typhimurium

Richelle C. Charles, Jason B. Harris, [ ... ], Edward T. Ryan

Maximum Entropy Reconstructions of Dynamic Signaling Networks from Quantitative Proteomics Data

Jason W. Locasale, Alejandro Wolf-Yadlin

Reverse Engineering of the Spindle Assembly Checkpoint

Andreas Doncic, Eshel Ben-Jacob, Shmuel Einav, Naama Barkai

Coupling between Properties of the Protein Shape and the Rate of Protein Folding

Dmitry N. Ivankov, Natalya S. Bogatyreva, Michail Yu Lobanov, Oxana V. Galzitskaya

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