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Proteomics

Proteomics-Based Systems Biology Modeling of Bovine Germinal Vesicle Stage Oocyte and Cumulus Cell Interaction

Divyaswetha Peddinti, Erdogan Memili, Shane C. Burgess

published 21 Jun 2010

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Integrative Proteomic Analysis of Serum and Peritoneal Fluids Helps Identify Proteins that Are Up-Regulated in Serum of Women with Ovarian Cancer

Lynn M. Amon, Wendy Law, Matthew P. Fitzgibbon, Jennifer A. Gross, Kathy O'Briant, Amelia Peterson, Charles Drescher, Daniel B. Martin, Martin McIntosh

published 15 Jun 2010

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“Topological Significance” Analysis of Gene Expression and Proteomic Profiles from Prostate Cancer Cells Reveals Key Mechanisms of Androgen Response

Adaikkalam Vellaichamy, Zoltán Dezső, Lellean JeBailey, Arul M. Chinnaiyan, Arun Sreekumar, Alexey I. Nesvizhskii, Gilbert S. Omenn, Andrej Bugrim

published 03 Jun 2010

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VitAL: Viterbi Algorithm for de novo Peptide Design

E. Besray Unal, Attila Gursoy, Burak Erman

published 02 Jun 2010

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Reconstruction and Validation of RefRec: A Global Model for the Yeast Molecular Interaction Network

Tommi Aho, Henrikki Almusa, Jukka Matilainen, Antti Larjo, Pekka Ruusuvuori, Kaisa-Leena Aho, Thomas Wilhelm, Harri Lähdesmäki, Andreas Beyer, Manu Harju, Sharif Chowdhury, Kalle Leinonen, Christophe Roos, Olli Yli-Harja

published 14 May 2010

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Searching for Signaling Balance through the Identification of Genetic Interactors of the Rab Guanine-Nucleotide Dissociation Inhibitor gdi-1

Anna Y. Lee, Richard Perreault, Sharon Harel, Elodie L. Boulier, Matthew Suderman, Michael Hallett, Sarah Jenna

published 13 May 2010

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Transcriptional and Translational Regulatory Responses to Iron Limitation in the Globally Distributed Marine Bacterium Candidatus Pelagibacter ubique

Daniel P. Smith, Joshua B. Kitner, Angela D. Norbeck, Therese R. Clauss, Mary S. Lipton, Michael S. Schwalbach, Laura Steindler, Carrie D. Nicora, Richard D. Smith, Stephen J. Giovannoni

published 05 May 2010

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Novel Approaches to Detect Serum Biomarkers for Clinical Response to Interferon-β Treatment in Multiple Sclerosis

Kaushal S. Gandhi, Fiona C. McKay, Eve Diefenbach, Ben Crossett, Stephen D. Schibeci, Robert N. Heard, Graeme J. Stewart, David R. Booth, Jonathan W. Arthur

published 05 May 2010

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Dynamic Zebrafish Interactome Reveals Transcriptional Mechanisms of Dioxin Toxicity

Andrey Alexeyenko, Deena M. Wassenberg, Edward K. Lobenhofer, Jerry Yen, Elwood Linney, Erik L. L. Sonnhammer, Joel N. Meyer

published 05 May 2010

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Novel Snail1 Target Proteins in Human Colon Cancer Identified by Proteomic Analysis

María Jesús Larriba, Juan Casado-Vela, Natalia Pendás-Franco, Raúl Peña, Antonio García de Herreros, María Teresa Berciano, Miguel Lafarga, J. Ignacio Casal, Alberto Muñoz

published 20 Apr 2010

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Improved Microarray-Based Decision Support with Graph Encoded Interactome Data

Anneleen Daemen, Marco Signoretto, Olivier Gevaert, Johan A. K. Suykens, Bart De Moor

published 19 Apr 2010

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Differential Proteomic Analysis of Arabidopsis thaliana Genotypes Exhibiting Resistance or Susceptibility to the Insect Herbivore, Plutella xylostella

Richard M. Collins, Muhammed Afzal, Deborah A. Ward, Mark C. Prescott, Steven M. Sait, Huw H. Rees, A. Brian Tomsett

published 08 Apr 2010

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A Proteomic Approach for the Diagnosis of Bacterial Meningitis

Sarah Jesse, Petra Steinacker, Stefan Lehnert, Martin Sdzuj, Lukas Cepek, Hayrettin Tumani, Olaf Jahn, Holger Schmidt, Markus Otto

published 08 Apr 2010

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