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Proteomics

Aptamer-Based Multiplexed Proteomic Technology for Biomarker Discovery

Larry Gold, Deborah Ayers, Jennifer Bertino, Christopher Bock, Ashley Bock, Edward N. Brody, Jeff Carter, Andrew B. Dalby, Bruce E. Eaton, Tim Fitzwater, Dylan Flather, Ashley Forbes, Trudi Foreman, Cate Fowler, Bharat Gawande, Meredith Goss, Magda Gunn, Shashi Gupta, Dennis Halladay, Jim Heil, Joe Heilig, Brian Hicke, Gregory Husar, Nebojsa Janjic, Thale Jarvis, Susan Jennings, Evaldas Katilius, Tracy R. Keeney, Nancy Kim, Tad H. Koch, Stephan Kraemer, Luke Kroiss, Ngan Le, Daniel Levine, Wes Lindsey, Bridget Lollo, Wes Mayfield, Mike Mehan, Robert Mehler, Sally K. Nelson, Michele Nelson, Dan Nieuwlandt, Malti Nikrad, Urs Ochsner, Rachel M. Ostroff, Matt Otis, Thomas Parker, Steve Pietrasiewicz, Daniel I. Resnicow, John Rohloff, Glenn Sanders, Sarah Sattin, Daniel Schneider, Britta Singer, Martin Stanton, Alana Sterkel, Alex Stewart, Suzanne Stratford, Jonathan D. Vaught, Mike Vrkljan, Jeffrey J. Walker, Mike Watrobka, Sheela Waugh, Allison Weiss, Sheri K. Wilcox, Alexey Wolfson, Steven K. Wolk, Chi Zhang, Dom Zichi

published 07 Dec 2010

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Unlocking Biomarker Discovery: Large Scale Application of Aptamer Proteomic Technology for Early Detection of Lung Cancer

Rachel M. Ostroff, William L. Bigbee, Wilbur Franklin, Larry Gold, Mike Mehan, York E. Miller, Harvey I. Pass, William N. Rom, Jill M. Siegfried, Alex Stewart, Jeffrey J. Walker, Joel L. Weissfeld, Stephen Williams, Dom Zichi, Edward N. Brody

published 07 Dec 2010

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Screening of Human Tumor Antigens for CD4⁺ T Cell Epitopes by Combination of HLA-Transgenic Mice, Recombinant Adenovirus and Antigen Peptide Libraries

Wolfram Osen, Sabine Soltek, Mingxia Song, Barbara Leuchs, Julia Steitz, Thomas Tüting, Stefan B. Eichmüller, Xuan-Duc Nguyen, Dirk Schadendorf, Annette Paschen

published 30 Nov 2010

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Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene

Raymond J. DiDonato Jr., Nelson D. Young, Jessica E. Butler, Kuk-Jeong Chin, Kim K. Hixson, Paula Mouser, Mary S. Lipton, Robert DeBoy, Barbara A. Methé

published 19 Nov 2010

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The Preferred Substrates for Transglutaminase 2 in a Complex Wheat Gluten Digest Are Peptide Fragments Harboring Celiac Disease T-Cell Epitopes

Siri Dørum, Magnus Ø. Arntzen, Shuo-Wang Qiao, Anders Holm, Christian J. Koehler, Bernd Thiede, Ludvig M. Sollid, Burkhard Fleckenstein

published 19 Nov 2010

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RAId_aPS: MS/MS Analysis with Multiple Scoring Functions and Spectrum-Specific Statistics

Gelio Alves, Aleksey Y. Ogurtsov, Yi-Kuo Yu

published 16 Nov 2010

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An Empirical Strategy for Characterizing Bacterial Proteomes across Species in the Absence of Genomic Sequences

Joshua E. Turse, Matthew J. Marshall, James K. Fredrickson, Mary S. Lipton, Stephen J. Callister

published 12 Nov 2010

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Thermodynamic Additivity of Sequence Variations: An Algorithm for Creating High Affinity Peptides Without Large Libraries or Structural Information

Matthew P. Greving, Paul E. Belcher, Chris W. Diehnelt, Maria J. Gonzalez-Moa, Jack Emery, Jinglin Fu, Stephen Albert Johnston, Neal W. Woodbury

published 11 Nov 2010

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Portrait of a Pathogen: The Mycobacterium tuberculosis Proteome In Vivo

Nicole A. Kruh, Jolynn Troudt, Angelo Izzo, Jessica Prenni, Karen M. Dobos

published 11 Nov 2010

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Proteome Analysis of Borrelia burgdorferi Response to Environmental Change

Thomas E. Angel, Benjamin J. Luft, Xiaohua Yang, Carrie D. Nicora, David G. Camp II, Jon M. Jacobs, Richard D. Smith

published 02 Nov 2010

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DEGAS: De Novo Discovery of Dysregulated Pathways in Human Diseases

Igor Ulitsky, Akshay Krishnamurthy, Richard M. Karp, Ron Shamir

published 19 Oct 2010

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Blood Peptidome-Degradome Profile of Breast Cancer

Yufeng Shen, Nikola Tolić, Tao Liu, Rui Zhao, Brianne O. Petritis, Marina A. Gritsenko, David G. Camp, Ronald J. Moore, Samuel O. Purvine, Francisco J. Esteva, Richard D. Smith

published 18 Oct 2010

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Proteins Involved in Platelet Signaling Are Differentially Regulated in Acute Coronary Syndrome: A Proteomic Study

Andrés Fernández Parguiña, Lilian Grigorian-Shamajian, Rosa M. Agra, Elvis Teijeira-Fernández, Isaac Rosa, Jana Alonso, Juan E. Viñuela-Roldán, Ana Seoane, José Ramón González-Juanatey, Ángel García

published 14 Oct 2010

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