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Proteomic databases

Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument

Chengjian Tu, Jun Li, [ ... ], Jun Qu

PRIMO: An Interactive Homology Modeling Pipeline

Rowan Hatherley, David K. Brown, Michael Glenister, Özlem Tastan Bishop

Proteomic Biomarkers for Acute Interstitial Lung Disease in Gefitinib-Treated Japanese Lung Cancer Patients

Fredrik Nyberg, Atsushi Ogiwara, [ ... ], Harubumi Kato

Aureolib — A Proteome Signature Library: Towards an Understanding of Staphylococcus aureus Pathophysiology

Stephan Fuchs, Daniela Zühlke, [ ... ], Susanne Engelmann

PDBrenum: A webserver and program providing Protein Data Bank files renumbered according to their UniProt sequences

Bulat Faezov, Roland L. Dunbrack Jr.

Interface of the Polarizable Continuum Model of Solvation with Semi-Empirical Methods in the GAMESS Program

Casper Steinmann, Kristoffer L. Blædel, Anders S. Christensen, Jan H. Jensen

Urinary Prognostic Biomarkers and Classification of IgA Nephropathy by High Resolution Mass Spectrometry Coupled with Liquid Chromatography

Shiva Kalantari, Dorothea Rutishauser, [ ... ], Roman A. Zubarev

Flux Balance Analysis with Objective Function Defined by Proteomics Data—Metabolism of Mycobacterium tuberculosis Exposed to Mefloquine

Daniel Montezano, Laura Meek, [ ... ], José C. M. Bermudez

Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins

Mallika Iyer, Zhanwen Li, [ ... ], Adam Godzik

High-Throughput Proteomics Detection of Novel Splice Isoforms in Human Platelets

Karen A. Power, James P. McRedmond, [ ... ], Peadar Ó Gaora

Development of Biomarkers for Screening Hepatocellular Carcinoma Using Global Data Mining and Multiple Reaction Monitoring

Hyunsoo Kim, Kyunggon Kim, [ ... ], Youngsoo Kim

Optimization of Plasma Sample Pretreatment for Quantitative Analysis Using iTRAQ Labeling and LC-MALDI-TOF/TOF

Magdalena Luczak, Lukasz Marczak, Maciej Stobiecki

“Topological Significance” Analysis of Gene Expression and Proteomic Profiles from Prostate Cancer Cells Reveals Key Mechanisms of Androgen Response

Adaikkalam Vellaichamy, Zoltán Dezső, [ ... ], Andrej Bugrim

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