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Proteomic databases

ZnO and TiO₂ nanoparticles alter the ability of Bacillus subtilis to fight against a stress

Elise Eymard-Vernain, Sylvie Luche, Thierry Rabilloud, Cécile Lelong

published 12 Oct 2020

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New label-free methods for protein relative quantification applied to the investigation of an animal model of Huntington Disease

Flora Cozzolino, Alfredo Landolfi, Ilaria Iacobucci, Vittoria Monaco, Marianna Caterino, Simona Celentano, Chiara Zuccato, Elena Cattaneo, Maria Monti

published 04 Sep 2020

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Side chain flexibility and the symmetry of protein homodimers

Yaffa Shalit, Inbal Tuvi-Arad

published 24 Jul 2020

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Methylglyoxal and D-lactate in cisplatin-induced acute kidney injury: Investigation of the potential mechanism via fluorogenic derivatization liquid chromatography-tandem mass spectrometry (FD-LC-MS/MS) proteomic analysis

Shih-Ming Chen, Tsung-Hui Chen, Hui-Ting Chang, Tzu-Yao Lin, Chia-Yu Lin, Pei-Yun Tsai, Kazuhiro Imai, Chien-Ming Chen, Jen-Ai Lee

published 10 Jul 2020

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Visualisation tools for dependent peptide searches to support the exploration of in vitro protein modifications

George W. Preston, Liping Yang, David H. Phillips, Claudia S. Maier

published 08 Jul 2020

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Fermentable fiber-induced hepatocellular carcinoma in mice recapitulates gene signatures found in human liver cancer

Darshan Shimoga Chandrashekar, Rachel M. Golonka, Beng San Yeoh, David J. Gonzalez, Mathias Heikenwälder, Andrew T. Gerwirtz, Sooryanarayana Varambally, Matam Vijay-Kumar

published 19 Jun 2020

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Laser capture microdissection in combination with mass spectrometry: Approach to characterization of tissue-specific proteomes of Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea)

Pavel Roudnický, David Potěšil, Zbyněk Zdráhal, Milan Gelnar, Martin Kašný

published 17 Jun 2020

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Comparing serum protein levels can aid in differentiating HPV-negative and -positive oropharyngeal squamous cell carcinoma patients

Amy Dickinson, Mayank Saraswat, Stina Syrjänen, Tiialotta Tohmola, Robert Silén, Reija Randén-Brady, Timo Carpén, Jaana Hagström, Caj Haglund, Petri Mattila, Antti Mäkitie, Sakari Joenväärä, Suvi Silén

published 15 Jun 2020

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Bayesian networks established functional differences between breast cancer subtypes

Lucía Trilla-Fuertes, Angelo Gámez-Pozo, Jorge M. Arevalillo, Rocío López-Vacas, Elena López-Camacho, Guillermo Prado-Vázquez, Andrea Zapater-Moros, Mariana Díaz-Almirón, María Ferrer-Gómez, Hilario Navarro, Paolo Nanni, Pilar Zamora, Enrique Espinosa, Paloma Maín, Juan Ángel Fresno Vara

published 11 Jun 2020

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Interaction between Mas1 and AT1R_A contributes to enhancement of skeletal muscle angiogenesis by angiotensin-(1-7) in Dahl salt-sensitive rats

Eric C. Exner, Aron M. Geurts, Brian R. Hoffmann, Marc Casati, Timothy Stodola, Nikita R. Dsouza, Michael Zimmermann, Julian H. Lombard, Andrew S. Greene

published 23 Apr 2020

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Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins

Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Mayya Sedova, Adam Godzik

published 12 Mar 2020

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Integrative proteomic and glycoproteomic profiling of Mycobacterium tuberculosis culture filtrate

Paula Tucci, Madelón Portela, Carlos Rivas Chetto, Gualberto González-Sapienza, Mónica Marín

published 03 Mar 2020

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Variability in protein cargo detection in technical and biological replicates of exosome-enriched extracellular vesicles

Suma Tiruvayipati, Don Wolfgeher, Ming Yue, FangFang Duan, Jorge Andrade, Hui Jiang, Lucia Schuger

published 02 Mar 2020

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