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Proteomic databases

Global Substrate Profiling of Proteases in Human Neutrophil Extracellular Traps Reveals Consensus Motif Predominantly Contributed by Elastase

Anthony J. O’Donoghue, Ye Jin, [ ... ], Terry W. Hermiston

C/VDdb: A multi-omics expression profiling database for a knowledge-driven approach in cardiovascular disease (CVD)

Marco Fernandes, Alisha Patel, Holger Husi

Quantifying Integrated Proteomic Responses to Iron Stress in the Globally Important Marine Diazotroph Trichodesmium

Joseph T. Snow, Despo Polyviou, [ ... ], Thomas S. Bibby

A rapid methods development workflow for high-throughput quantitative proteomic applications

Yan Chen, Jonathan Vu, [ ... ], Christopher J. Petzold

Evaluation of sodium deoxycholate as solubilization buffer for oil palm proteomics analysis

Benjamin Yii Chung Lau, Abrizah Othman

A Comparison of Methods for Classifying Clinical Samples Based on Proteomics Data: A Case Study for Statistical and Machine Learning Approaches

Dayle L. Sampson, Tony J. Parker, Zee Upton, Cameron P. Hurst

Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions

Ramu Anandakrishnan, Charles Baker, Saeed Izadi, Alexey V. Onufriev

Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

Jiangning Song, Hao Tan, [ ... ], James C. Whisstock

Accuracy and Reproducibility in Quantification of Plasma Protein Concentrations by Mass Spectrometry without the Use of Isotopic Standards

Gertjan Kramer, Yvonne Woolerton, [ ... ], Johannes M. F. G. Aerts

VitAL: Viterbi Algorithm for de novo Peptide Design

E. Besray Unal, Attila Gursoy, Burak Erman

Transcriptomic Analysis of Toxoplasma Development Reveals Many Novel Functions and Structures Specific to Sporozoites and Oocysts

Heather M. Fritz, Kerry R. Buchholz, [ ... ], John C. Boothroyd

Analysis of Expressed Genes of the Bacterium ‘Candidatus Phytoplasma Mali’ Highlights Key Features of Virulence and Metabolism

Christin Siewert, Toni Luge, [ ... ], Michael Kube

Using Bacteria to Determine Protein Kinase Specificity and Predict Target Substrates

Michael F. Chou, Sladjana Prisic, [ ... ], Daniel Schwartz

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