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Proteomic databases

Multi-omic analysis reveals enriched pathways associated with COVID-19 and COVID-19 severity

Danika Lipman, Sandra E. Safo, Thierry Chekouo

A systems radiation biology approach to unravel the role of chronic low-dose-rate gamma-irradiation in inducing premature senescence in endothelial cells

Gabriele Babini, Giorgio Baiocco, [ ... ], Andrea Ottolenghi

Modular automated bottom-up proteomic sample preparation for high-throughput applications

Yan Chen, Nurgul Kaplan Lease, [ ... ], Christopher J. Petzold

Proteomic analysis of the umbilical cord in fetal growth restriction and preeclampsia

Matthew S. Conrad, Miranda L. Gardner, [ ... ], Marwan Ma’ayeh

Linking protein structural and functional change to mutation using amino acid networks

Cristina Sotomayor-Vivas, Enrique Hernández-Lemus, Rodrigo Dorantes-Gilardi

Gene excavation and expression analysis of CYP and UGT related to the post modifying stage of gypenoside biosynthesis in Gynostemma pentaphyllum (Thunb.) Makino by comprehensive analysis of RNA and proteome sequencing

Yangmei Zhang, Qicong Chen, [ ... ], Yaosheng Wu

SpeCollate: Deep cross-modal similarity network for mass spectrometry data based peptide deductions

Muhammad Usman Tariq, Fahad Saeed

Proteogenomic analysis of pancreatic cancer subtypes

Doris Kafita, Panji Nkhoma, Mildred Zulu, Musalula Sinkala

Heterogeneity in proline hydroxylation of fibrillar collagens observed by mass spectrometry

Michele Kirchner, Haiteng Deng, Yujia Xu

The influence of dataset homology and a rigorous evaluation strategy on protein secondary structure prediction

Teng-Ruei Chen, Chia-Hua Lo, Sheng-Hung Juan, Wei-Cheng Lo

PDBrenum: A webserver and program providing Protein Data Bank files renumbered according to their UniProt sequences

Bulat Faezov, Roland L. Dunbrack Jr.

Molecular dynamics analysis of N-acetyl-D-glucosamine against specific SARS-CoV-2’s pathogenicity factors

Ömür Baysal, Naeem Abdul Ghafoor, [ ... ], Volha Kniazeva

Dual proteomics of Drosophila melanogaster hemolymph infected with the heritable endosymbiont Spiroplasma poulsonii

Florent Masson, Samuel Rommelaere, [ ... ], Bruno Lemaitre

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