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Proteomic databases

New insights into disordered proteins and regions according to the FOD-M model

Irena Roterman, Katarzyna Stapor, Piotr Fabian, Leszek Konieczny

Proteomic analysis of Masson pine with high resistance to pine wood nematodes

Jingbin GAO, Ting PAN, [ ... ], Liuyi Xu

SARS-CoV-2-positive patients display considerable differences in proteome diversity in urine, nasopharyngeal, gargle solution and bronchoalveolar lavage fluid samples

Javan Okendo, Clarisse Musanabaganwa, [ ... ], Harris Onywera

Predicting compound-protein interaction using hierarchical graph convolutional networks

Danh Bui-Thi, Emmanuel Rivière, Pieter Meysman, Kris Laukens

Simplifying MS1 and MS2 spectra to achieve lower mass error, more dynamic range, and higher peptide identification confidence on the Bruker timsTOF Pro

Daryl Wilding-McBride, Laura F. Dagley, [ ... ], Andrew I. Webb

Subtyping of common complex diseases and disorders by integrating heterogeneous data. Identifying clusters among women with lower urinary tract symptoms in the LURN study

Victor P. Andreev, Margaret E. Helmuth, [ ... ], The LURN Study Group

Multi-omic analysis reveals enriched pathways associated with COVID-19 and COVID-19 severity

Danika Lipman, Sandra E. Safo, Thierry Chekouo

A systems radiation biology approach to unravel the role of chronic low-dose-rate gamma-irradiation in inducing premature senescence in endothelial cells

Gabriele Babini, Giorgio Baiocco, [ ... ], Andrea Ottolenghi

Modular automated bottom-up proteomic sample preparation for high-throughput applications

Yan Chen, Nurgul Kaplan Lease, [ ... ], Christopher J. Petzold

Proteomic analysis of the umbilical cord in fetal growth restriction and preeclampsia

Matthew S. Conrad, Miranda L. Gardner, [ ... ], Marwan Ma’ayeh

Linking protein structural and functional change to mutation using amino acid networks

Cristina Sotomayor-Vivas, Enrique Hernández-Lemus, Rodrigo Dorantes-Gilardi

Gene excavation and expression analysis of CYP and UGT related to the post modifying stage of gypenoside biosynthesis in Gynostemma pentaphyllum (Thunb.) Makino by comprehensive analysis of RNA and proteome sequencing

Yangmei Zhang, Qicong Chen, [ ... ], Yaosheng Wu

SpeCollate: Deep cross-modal similarity network for mass spectrometry data based peptide deductions

Muhammad Usman Tariq, Fahad Saeed

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