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Proteomic databases

Functionally distinct BMP1 isoforms show an opposite pattern of abundance in plasma from non-small cell lung cancer subjects and controls

Margaret K. R. Donovan, Yingxiang Huang, John E. Blume, Jian Wang, Daniel Hornburg, Shadi Ferdosi, Iman Mohtashemi, Sangtae Kim, Marwin Ko, Ryan W. Benz, Theodore L. Platt, Serafim Batzoglou, Luis A. Diaz, Omid C. Farokhzad, Asim Siddiqui

published 29 Mar 2023

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Indenyl-thiazole and indenyl-formazan derivatives: Synthesis, anticancer screening studies, molecular-docking, and pharmacokinetic/ molin-spiration properties

Ghaidaa H. Alfaifi, Thoraya A. Farghaly, Magda H. Abdellattif

published 01 Mar 2023

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A novel approach to interrogating the effects of chemical warfare agent exposure using organ-on-a-chip technology and multiomic analysis

Tyler D. P. Goralski, Conor C. Jenkins, Daniel J. Angelini, Jennifer R. Horsmon, Elizabeth S. Dhummakupt, Gabrielle M. Rizzo, Brooke L. Simmons, Alvin T. Liem, Pierce A. Roth, Mark A. Karavis, Jessica M. Hill, Jennifer W. Sekowski, Kyle P. Glover

published 13 Feb 2023

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Proteomics biomarker discovery for individualized prevention of familial pancreatic cancer using statistical learning

Chung Shing Rex Ha, Martina Müller-Nurasyid, Agnese Petrera, Stefanie M. Hauck, Federico Marini, Detlef K. Bartsch, Emily P. Slater, Konstantin Strauch

published 26 Jan 2023

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A de novo MS1 feature detector for the Bruker timsTOF Pro

Daryl Wilding-McBride, Andrew I. Webb

published 30 Nov 2022

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Transection injury differentially alters the proteome of the human sural nerve

Monica J. Chau, Jorge E. Quintero, Eric Blalock, Stephanie Byrum, Samuel G. Mackintosh, Christopher Samaan, Greg A. Gerhardt, Craig G. van Horne

published 23 Nov 2022

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Characterization of peptide-protein relationships in protein ambiguity groups via bipartite graphs

Karin Schork, Michael Turewicz, Julian Uszkoreit, Jörg Rahnenführer, Martin Eisenacher

published 21 Oct 2022

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New insights into disordered proteins and regions according to the FOD-M model

Irena Roterman, Katarzyna Stapor, Piotr Fabian, Leszek Konieczny

published 10 Oct 2022

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Proteomic analysis of Masson pine with high resistance to pine wood nematodes

Jingbin GAO, Ting PAN, Xuelian CHEN, Qiang Wei, Liuyi Xu

published 12 Aug 2022

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SARS-CoV-2-positive patients display considerable differences in proteome diversity in urine, nasopharyngeal, gargle solution and bronchoalveolar lavage fluid samples

Javan Okendo, Clarisse Musanabaganwa, Peter Mwangi, Martin Nyaga, Harris Onywera

published 08 Aug 2022

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Predicting compound-protein interaction using hierarchical graph convolutional networks

Danh Bui-Thi, Emmanuel Rivière, Pieter Meysman, Kris Laukens

published 21 Jul 2022

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Simplifying MS1 and MS2 spectra to achieve lower mass error, more dynamic range, and higher peptide identification confidence on the Bruker timsTOF Pro

Daryl Wilding-McBride, Laura F. Dagley, Sukhdeep K. Spall, Giuseppe Infusini, Andrew I. Webb

published 07 Jul 2022

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Subtyping of common complex diseases and disorders by integrating heterogeneous data. Identifying clusters among women with lower urinary tract symptoms in the LURN study

Victor P. Andreev, Margaret E. Helmuth, Gang Liu, Abigail R. Smith, Robert M. Merion, Claire C. Yang, Anne P. Cameron, J. Eric Jelovsek, Cindy L. Amundsen, Brian T. Helfand, Catherine S. Bradley, John O. L. DeLancey, James W. Griffith, Alexander P. Glaser, Brenda W. Gillespie, J. Quentin Clemens, H. Henry Lai, The LURN Study Group

published 10 Jun 2022

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