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Proteomic databases

DomPep—A General Method for Predicting Modular Domain-Mediated Protein-Protein Interactions

Lei Li, Bing Zhao, Jun Du, Kaizhong Zhang, Charles X. Ling, Shawn Shun-Cheng Li

published 07 Oct 2011

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A Reference Proteomic Database of Lactobacillus plantarum CMCC-P0002

Li Zhu, Wei Hu, Datao Liu, Wanhong Tian, Gang Yu, Xiankai Liu, Jie Wang, Erling Feng, Xuemin Zhang, Bei Chen, Ming Zeng, Hengliang Wang

published 05 Oct 2011

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A Comparison of Methods for Classifying Clinical Samples Based on Proteomics Data: A Case Study for Statistical and Machine Learning Approaches

Dayle L. Sampson, Tony J. Parker, Zee Upton, Cameron P. Hurst

published 28 Sep 2011

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Protein X of Hepatitis B Virus: Origin and Structure Similarity with the Central Domain of DNA Glycosylase

Formijn J. van Hemert, Maarten A. A. van de Klundert, Vladimir V. Lukashov, Neeltje A. Kootstra, Ben Berkhout, Hans L. Zaaijer

published 05 Aug 2011

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Proteomic Biomarkers for Acute Interstitial Lung Disease in Gefitinib-Treated Japanese Lung Cancer Patients

Fredrik Nyberg, Atsushi Ogiwara, Chris G. Harbron, Takao Kawakami, Keiko Nagasaka, Sachiko Takami, Kazuya Wada, Hsiao-Kun Tu, Makiko Otsuji, Yutaka Kyono, Tae Dobashi, Yasuhiko Komatsu, Makoto Kihara, Shingo Akimoto, Ian S. Peers, Marie C. South, Tim Higenbottam, Masahiro Fukuoka, Koichiro Nakata, Yuichiro Ohe, Shoji Kudoh, Ib Groth Clausen, Toshihide Nishimura, György Marko-Varga, Harubumi Kato

published 20 Jul 2011

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Characterization of Serum Proteins Associated with IL28B Genotype among Patients with Chronic Hepatitis C

Derek D. Cyr, Joseph E. Lucas, J. Will Thompson, Keyur Patel, Paul J. Clark, Alexander Thompson, Hans L. Tillmann, John G. McHutchison, M. Arthur Moseley, Jeanette J. McCarthy

published 05 Jul 2011

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Predicting Protein Folds with Fold-Specific PSSM Libraries

Yoojin Hong, Sree Vamsee Chintapalli, Kyung Dae Ko, Gaurav Bhardwaj, Zhenhai Zhang, Damian van Rossum, Randen L. Patterson

published 16 Jun 2011

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The Effect of Using an Inappropriate Protein Database for Proteomic Data Analysis

Giselle M. Knudsen, Robert J. Chalkley

published 14 Jun 2011

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Solution Structures of the Acyl Carrier Protein Domain from the Highly Reducing Type I Iterative Polyketide Synthase CalE8

Jackwee Lim, Rong Kong, Elavazhagan Murugan, Chun Loong Ho, Zhao-Xun Liang, Daiwen Yang

published 02 Jun 2011

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Structure Collisions between Interacting Proteins

Dorothea Emig, Oliver Sander, Gabriele Mayr, Mario Albrecht

published 02 Jun 2011

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Identification of Antifreeze Proteins and Their Functional Residues by Support Vector Machine and Genetic Algorithms based on n-Peptide Compositions

Chin-Sheng Yu, Chih-Hao Lu

published 31 May 2011

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High Abundance Proteins Depletion vs Low Abundance Proteins Enrichment: Comparison of Methods to Reduce the Plasma Proteome Complexity

Renato Millioni, Serena Tolin, Lucia Puricelli, Stefano Sbrignadello, Gian Paolo Fadini, Paolo Tessari, Giorgio Arrigoni

published 04 May 2011

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A Mighty Small Heart: The Cardiac Proteome of Adult Drosophila melanogaster

Anthony Cammarato, Christian H. Ahrens, Nakissa N. Alayari, Ermir Qeli, Jasma Rucker, Mary C. Reedy, Christian M. Zmasek, Marjan Gucek, Robert N. Cole, Jennifer E. Van Eyk, Rolf Bodmer, Brian O'Rourke, Sanford I. Bernstein, D. Brian Foster

published 25 Apr 2011

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