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Proteomic databases

Respiratory extracellular vesicle isolation optimization through proteomic profiling of equine samples and identification of candidates for cell-of-origin studies

Elise Hickman, Victoria Carberry, Celeste Carberry, Bethanie Cooper, Angie L. Mordant, Allie Mills, Marina Sokolsky, Laura E. Herring, Neil E. Alexis, Meghan E. Rebuli, Ilona Jaspers, Katie Sheats, Julia E. Rager

published 24 Jan 2025

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Gentiopicroside-Induced gastric cancer necroptosis via the HIF-1 signaling pathway: A study involving molecular docking and experimental validation

Bo Xiong, Mingjie Fan, Zhihui Wang, Xiaolu Yang, Shan Cao, Jie Shen, Beibei Fan

published 21 Nov 2024

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Proteomic and ubiquitinome analysis reveal that microgravity affects glucose metabolism of mouse hearts by remodeling non-degradative ubiquitination

Xin Zhang, Xuemei Zhou, Zhiwei Tu, Lihua Qiang, Zhe Lu, Yuping Xie, Cui Hua Liu, Lingqiang Zhang, Yesheng Fu

published 14 Nov 2024

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Riddelline from Tamarix articulate as a potential anti-bacterial lead compound for novel antibiotics discovery: A comprehensive computational and toxicological studies

Abdullah M. Alnuqaydan

published 14 Nov 2024

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Unbiased complexome profiling and global proteomics analysis reveals mitochondrial impairment and potential changes at the intercalated disk in presymptomatic R14^Δ/+ mice hearts

Brian Foo, Hugo Amedei, Surmeet Kaur, Samir Jaawan, Angela Boshnakovska, Tanja Gall, Rudolf A. de Boer, Herman H. W. Silljé, Henning Urlaub, Peter Rehling, Christof Lenz, Stephan E. Lehnart

published 24 Oct 2024

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Proteome analysis provides insights into sex differences in Holothuria Scabra

Chuhang Cheng, FeiFei Wu, Yizhi Xu, Chunhua Ren, Ting Chen, Shella Li, Peihong Shen, Fajun Jiang

published 29 Aug 2024

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Assessing anti oxidant, antidiabetic potential and GCMS profiling of ethanolic root bark extract of Zanthoxylum rhetsa (Roxb.) DC: Supported by in vitro, in vivo and in silico molecular modeling

Apurba Kumar Barman, Sumaiya Mahadi, Md Arju Hossain, Rahima Begum, Rabindra Nath Acharyya, Marjana Alam, Md. Habibur Rahman, Nripendra Nath Biswas, A. S. M. Monjur Al Hossain

published 19 Aug 2024

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Protein ligand binding site prediction using graph transformer neural network

Ryuichiro Ishitani, Mizuki Takemoto, Kentaro Tomii

published 06 Aug 2024

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Comparative proteomics reveals that fatty acid metabolism is involved in myocardial adaptation to chronic hypoxic injury

Hu Chen, Shiran Yu, Xiaoyun Zhang, Yujie Gao, Hongqi Wang, Yuankun Li, Dongsheng He, Weikun Jia

published 17 Jun 2024

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Bioinformatics for Dentistry: A secondary database for the genetics of tooth development

Ava K. Chow, Rachel Low, Jerald Yuan, Karen K. Yee, Jaskaranjit Kaur Dhaliwal, Shanice Govia, Nazlee Sharmin

published 06 Jun 2024

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Prognostic biomarkers of intracerebral hemorrhage identified using targeted proteomics and machine learning algorithms

Shubham Misra, Yuki Kawamura, Praveen Singh, Shantanu Sengupta, Manabesh Nath, Zuhaibur Rahman, Pradeep Kumar, Amit Kumar, Praveen Aggarwal, Achal K. Srivastava, Awadh K. Pandit, Dheeraj Mohania, Kameshwar Prasad, Nishant K. Mishra, Deepti Vibha

published 03 Jun 2024

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Propensity score matching as an effective strategy for biomarker cohort design and omics data analysis

Masaki Maekawa, Atsushi Tanaka, Makiko Ogawa, Michael H. Roehrl

published 02 May 2024

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Bioinformatics pipeline for the systematic mining genomic and proteomic variation linked to rare diseases: The example of monogenic diabetes

Ksenia G. Kuznetsova, Jakub Vašíček, Dafni Skiadopoulou, Janne Molnes, Miriam Udler, Stefan Johansson, Pål Rasmus Njølstad, Alisa Manning, Marc Vaudel

published 18 Apr 2024

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