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Proteomic databases

Binding Modes of Peptidomimetics Designed to Inhibit STAT3

Ankur Dhanik, John S. McMurray, Lydia E. Kavraki

What Can We Learn from the Evolution of Protein-Ligand Interactions to Aid the Design of New Therapeutics?

Alicia P. Higueruelo, Adrian Schreyer, [ ... ], Will R. Pitt

CS-AMPPred: An Updated SVM Model for Antimicrobial Activity Prediction in Cysteine-Stabilized Peptides

William F. Porto, Állan S. Pires, Octavio L. Franco

iPiG: Integrating Peptide Spectrum Matches into Genome Browser Visualizations

Mathias Kuhring, Bernhard Y. Renard

PROSPER: An Integrated Feature-Based Tool for Predicting Protease Substrate Cleavage Sites

Jiangning Song, Hao Tan, [ ... ], Robert N. Pike

Learning from Decoys to Improve the Sensitivity and Specificity of Proteomics Database Search Results

Amit Kumar Yadav, Dhirendra Kumar, Debasis Dash

Proteomic Properties Reveal Phyloecological Clusters of Archaea

Nela Nikolic, Zlatko Smole, Anita Krisko

TRIP Database 2.0: A Manually Curated Information Hub for Accessing TRP Channel Interaction Network

Young-Cheul Shin, Soo-Yong Shin, [ ... ], Ju-Hong Jeon

Can the Energy Gap in the Protein-Ligand Binding Energy Landscape Be Used as a Descriptor in Virtual Ligand Screening?

Arsen V. Grigoryan, Hong Wang, Timothy J. Cardozo

The Temperature Dependent Proteomic Analysis of Thermotoga maritima

Zhuowei Wang, Wei Tong, [ ... ], Siqi Liu

GlycReSoft: A Software Package for Automated Recognition of Glycans from LC/MS Data

Evan Maxwell, Yan Tan, [ ... ], Joseph Zaia

An FD-LC-MS/MS Proteomic Strategy for Revealing Cellular Protein Networks: A Conditional Superoxide Dismutase 1 Knockout Cells

Tomoko Ichibangase, Yasuhiro Sugawara, [ ... ], Kazuhiro Imai

Conic Sampling: An Efficient Method for Solving Linear and Quadratic Programming by Randomly Linking Constraints within the Interior

Oliver Serang

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