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Proteomic databases

BioAssemblyModeler (BAM): User-Friendly Homology Modeling of Protein Homo- and Heterooligomers

Maxim V. Shapovalov, Qiang Wang, [ ... ], Roland L. Dunbrack Jr

Evaluation of Global Differential Gene and Protein Expression in Primary Pterygium: S100A8 and S100A9 as Possible Drivers of a Signaling Network

Aihua Hou, Wanwen Lan, [ ... ], Louis Tong

Assessment of Metabolomic and Proteomic Biomarkers in Detection and Prognosis of Progression of Renal Function in Chronic Kidney Disease

Esther Nkuipou-Kenfack, Flore Duranton, [ ... ], Harald Mischak

Structural Basis for the Site-Specific Incorporation of Lysine Derivatives into Proteins

Veronika Flügel, Milan Vrabel, Sabine Schneider

Automated Protein Turnover Calculations from ¹⁵N Partial Metabolic Labeling LC/MS Shotgun Proteomics Data

David Lyon, Maria Angeles Castillejo, [ ... ], Volker Egelhofer

New Insights into Dehalococcoides mccartyi Metabolism from a Reconstructed Metabolic Network-Based Systems-Level Analysis of D. mccartyi Transcriptomes

M. Ahsanul Islam, Alison S. Waller, [ ... ], Radhakrishnan Mahadevan

Intermolecular β-Strand Networks Avoid Hub Residues and Favor Low Interconnectedness: A Potential Protection Mechanism against Chain Dissociation upon Mutation

Giovanni Feverati, Mounia Achoch, Laurent Vuillon, Claire Lesieur

Analysis of Expressed Genes of the Bacterium ‘Candidatus Phytoplasma Mali’ Highlights Key Features of Virulence and Metabolism

Christin Siewert, Toni Luge, [ ... ], Michael Kube

The Probabilistic Convolution Tree: Efficient Exact Bayesian Inference for Faster LC-MS/MS Protein Inference

Oliver Serang

Detection of Viral Proteins in Human Cells Lines by Xeno-Proteomics: Elimination of the Last Valid Excuse for Not Testing Every Cellular Proteome Dataset for Viral Proteins

Alexey L. Chernobrovkin, Roman A. Zubarev

Global Genome Response of Escherichia coli O157∶H7 Sakai during Dynamic Changes in Growth Kinetics Induced by an Abrupt Downshift in Water Activity

Chawalit Kocharunchitt, Thea King, [ ... ], Tom Ross

Escherichia coli Response to Uranyl Exposure at Low pH and Associated Protein Regulations

Arbia Khemiri, Marie Carrière, [ ... ], Catherine Berthomieu

The Core Proteome and Pan Proteome of Salmonella Paratyphi A Epidemic Strains

Li Zhang, Di Xiao, [ ... ], Biao Kan

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