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Proteomic databases

Reproducible Analysis of Post-Translational Modifications in Proteomes—Application to Human Mutations

Alex S. Holehouse, Kristen M. Naegle

published 14 Dec 2015

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orthoFind Facilitates the Discovery of Homologous and Orthologous Proteins

Pablo Mier, Miguel A. Andrade-Navarro, Antonio J. Pérez-Pulido

published 01 Dec 2015

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Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach

Owen P. Leiser, Eric D. Merkley, Brian H. Clowers, Brooke L. Deatherage Kaiser, Andy Lin, Janine R. Hutchison, Angela M. Melville, David M. Wagner, Paul S. Keim, Jeffrey T. Foster, Helen W. Kreuzer

published 24 Nov 2015

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DBGC: A Database of Human Gastric Cancer

Chao Wang, Jun Zhang, Mingdeng Cai, Zhenggang Zhu, Wenjie Gu, Yingyan Yu, Xiaoyan Zhang

published 13 Nov 2015

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Quantifying Integrated Proteomic Responses to Iron Stress in the Globally Important Marine Diazotroph Trichodesmium

Joseph T. Snow, Despo Polyviou, Paul Skipp, Nathan A. M. Chrismas, Andrew Hitchcock, Richard Geider, C. Mark Moore, Thomas S. Bibby

published 12 Nov 2015

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A Pilot Proteogenomic Study with Data Integration Identifies MCT1 and GLUT1 as Prognostic Markers in Lung Adenocarcinoma

Paul A. Stewart, Katja Parapatics, Eric A. Welsh, André C. Müller, Haoyun Cao, Bin Fang, John M. Koomen, Steven A. Eschrich, Keiryn L. Bennett, Eric B. Haura

published 05 Nov 2015

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DisPredict: A Predictor of Disordered Protein Using Optimized RBF Kernel

Sumaiya Iqbal, Md Tamjidul Hoque

published 30 Oct 2015

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Composition of Overlapping Protein-Protein and Protein-Ligand Interfaces

Ruzianisra Mohamed, Jennifer Degac, Volkhard Helms

published 30 Oct 2015

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CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area

Genki Terashi, Mayuko Takeda-Shitaka

published 26 Oct 2015

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Activity Augmentation of Amphioxus Peptidoglycan Recognition Protein BbtPGRP3 via Fusion with a Chitin Binding Domain

Wen-Jie Wang, Wang Cheng, Ming Luo, Qingyu Yan, Hong-Mei Yu, Qiong Li, Dong-Dong Cao, Shengfeng Huang, Anlong Xu, Roy A. Mariuzza, Yuxing Chen, Cong-Zhao Zhou

published 19 Oct 2015

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Accuracy and Reproducibility in Quantification of Plasma Protein Concentrations by Mass Spectrometry without the Use of Isotopic Standards

Gertjan Kramer, Yvonne Woolerton, Jan P. van Straalen, Johannes P. C. Vissers, Nick Dekker, James I. Langridge, Robert J. Beynon, Dave Speijer, Auguste Sturk, Johannes M. F. G. Aerts

published 16 Oct 2015

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Novel Endogenous, Insulin-Stimulated Akt2 Protein Interaction Partners in L6 Myoblasts

Michael Caruso, Xiangmin Zhang, Danjun Ma, Zhao Yang, Yue Qi, Zhengping Yi

published 14 Oct 2015

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Analyses of the Sequence and Structural Properties Corresponding to Pentapeptide and Large Palindromes in Proteins

Settu Sridhar, Mallapragada Nagamruta, Kunchur Guruprasad

published 14 Oct 2015

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