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Proteomic databases

SAFlex: A structural alphabet extension to integrate protein structural flexibility and missing data information

Ikram Allam, Delphine Flatters, Géraldine Caumes, Leslie Regad, Vincent Delos, Gregory Nuel, Anne-Claude Camproux

published 05 Jul 2018

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Investigation of protein quaternary structure via stoichiometry and symmetry ınformation

Selcuk Korkmaz, Jose M. Duarte, Andreas Prlić, Dincer Goksuluk, Gokmen Zararsiz, Osman Saracbasi, Stephen K. Burley, Peter W. Rose

published 04 Jun 2018

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Proteomics and transcriptomics analyses of ataxia telangiectasia cells treated with Dexamethasone

Michele Menotta, Sara Orazi, Anna Maria Gioacchini, Chiara Spapperi, Anastasia Ricci, Luciana Chessa, Mauro Magnani

published 02 Apr 2018

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The influence of transcript assembly on the proteogenomics discovery of microproteins

Jiao Ma, Alan Saghatelian, Maxim Nikolaievich Shokhirev

published 27 Mar 2018

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Characterization of the adult Aedes aegypti early midgut peritrophic matrix proteome using LC-MS

Shavonn R. Whiten, W. Keith Ray, Richard F. Helm, Zach N. Adelman

published 23 Mar 2018

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RLE plots: Visualizing unwanted variation in high dimensional data

Luke C. Gandolfo, Terence P. Speed

published 05 Feb 2018

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Salivary proteomics of healthy dogs: An in depth catalog

Sheila M. F. Torres, Eva Furrow, Clarissa P. Souza, Jennifer L. Granick, Ebbing P. de Jong, Timothy J. Griffin, Xiong Wang

published 12 Jan 2018

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QCloud: A cloud-based quality control system for mass spectrometry-based proteomics laboratories

Cristina Chiva, Roger Olivella, Eva Borràs, Guadalupe Espadas, Olga Pastor, Amanda Solé, Eduard Sabidó

published 11 Jan 2018

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Comparison of genomes and proteomes of four whole genome-sequenced Campylobacter jejuni from different phylogenetic backgrounds

Clifford G. Clark, Chih-yu Chen, Chrystal Berry, Matthew Walker, Stuart J. McCorrister, Patrick M. Chong, Garrett R. Westmacott

published 02 Jan 2018

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Accurate and fast feature selection workflow for high-dimensional omics data

Yasset Perez-Riverol, Max Kuhn, Juan Antonio Vizcaíno, Marc-Phillip Hitz, Enrique Audain

published 20 Dec 2017

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Knowledge-based prediction of protein backbone conformation using a structural alphabet

Iyanar Vetrivel, Swapnil Mahajan, Manoj Tyagi, Lionel Hoffmann, Yves-Henri Sanejouand, Narayanaswamy Srinivasan, Alexandre G. de Brevern, Frédéric Cadet, Bernard Offmann

published 21 Nov 2017

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Estimation of the proteomic cancer co-expression sub networks by using association estimators

Cihat Erdoğan, Zeyneb Kurt, Banu Diri

published 16 Nov 2017

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A combined transcriptome and proteome analysis extends the allergome of house dust mite Dermatophagoides species

Véronique Bordas-Le Floch, Maxime Le Mignon, Laetitia Bussières, Karine Jain, Armelle Martelet, Véronique Baron-Bodo, Emmanuel Nony, Laurent Mascarell, Philippe Moingeon

published 05 Oct 2017

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