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Protein structure prediction

Evidence for a Transport-Trap Mode of Drosophila melanogaster gurken mRNA Localization

Lan Lan, Shengyin Lin, Sui Zhang, Robert S. Cohen

published 12 Nov 2010

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Potentials of Mean Force for Protein Structure Prediction Vindicated, Formalized and Generalized

Thomas Hamelryck, Mikael Borg, Martin Paluszewski, Jonas Paulsen, Jes Frellsen, Christian Andreetta, Wouter Boomsma, Sandro Bottaro, Jesper Ferkinghoff-Borg

published 10 Nov 2010

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Apolipophorin-III Mediates Antiplasmodial Epithelial Responses in Anopheles gambiae (G3) Mosquitoes

Lalita Gupta, Ju Young Noh, Yong Hun Jo, Seung Han Oh, Sanjeev Kumar, Mi Young Noh, Yong Seok Lee, Sung-Jae Cha, Sook Jae Seo, Iksoo Kim, Yeon Soo Han, Carolina Barillas-Mury

published 02 Nov 2010

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A Novel Side-Chain Orientation Dependent Potential Derived from Random-Walk Reference State for Protein Fold Selection and Structure Prediction

Jian Zhang, Yang Zhang

published 27 Oct 2010

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Yeast Biological Networks Unfold the Interplay of Antioxidants, Genome and Phenotype, and Reveal a Novel Regulator of the Oxidative Stress Response

Jose M. Otero, Manos A. Papadakis, D. B. R. K. Gupta Udatha, Jens Nielsen, Gianni Panagiotou

published 25 Oct 2010

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Of Bits and Bugs — On the Use of Bioinformatics and a Bacterial Crystal Structure to Solve a Eukaryotic Repeat-Protein Structure

Almut Graebsch, Stéphane Roche, Dirk Kostrewa, Johannes Söding, Dierk Niessing

published 14 Oct 2010

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A Novel Secretory Poly-Cysteine and Histidine-Tailed Metalloprotein (Ts-PCHTP) from Trichinella spiralis (Nematoda)

Georgi Radoslavov, Rositsa Jordanova, Denitsa Teofanova, Katya Georgieva, Petar Hristov, Marco Salomone-Stagni, Eva Liebau, Ilia Bankov

published 13 Oct 2010

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Presaging Critical Residues in Protein interfaces-Web Server (PCRPi-W): A Web Server to Chart Hot Spots in Protein Interfaces

Joan Segura Mora, Salam A. Assi, Narcis Fernandez-Fuentes

published 23 Aug 2010

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Optimized Hydrophobic Interactions and Hydrogen Bonding at the Target-Ligand Interface Leads the Pathways of Drug-Designing

Rohan Patil, Suranjana Das, Ashley Stanley, Lumbani Yadav, Akulapalli Sudhakar, Ashok K. Varma

published 16 Aug 2010

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Virtual Screening for HIV Protease Inhibitors: A Comparison of AutoDock 4 and Vina

Max W. Chang, Christian Ayeni, Sebastian Breuer, Bruce E. Torbett

published 04 Aug 2010

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Defining the Functional Domain of Programmed Cell Death 10 through Its Interactions with Phosphatidylinositol-3,4,5-Trisphosphate

Christopher F. Dibble, Jeremy A. Horst, Michael H. Malone, Kun Park, Brenda Temple, Holly Cheeseman, Justin R. Barbaro, Gary L. Johnson, Sompop Bencharit

published 23 Jul 2010

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Structural Disorder within Henipavirus Nucleoprotein and Phosphoprotein: From Predictions to Experimental Assessment

Johnny Habchi, Laurent Mamelli, Hervé Darbon, Sonia Longhi

published 21 Jul 2010

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Modeling-Dependent Protein Characterization of the Rice Aldehyde Dehydrogenase (ALDH) Superfamily Reveals Distinct Functional and Structural Features

Simeon O. Kotchoni, Jose C. Jimenez-Lopez, Dongying Gao, Vincent Edwards, Emma W. Gachomo, Venu M. Margam, Manfredo J. Seufferheld

published 12 Jul 2010

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