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Protein structure prediction

Sequence statistics of tertiary structural motifs reflect protein stability

Fan Zheng, Gevorg Grigoryan

Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning

Pedro L. Teixeira, Jeff L. Mendenhall, [ ... ], Jens Meiler

Structural features of PhoX, one of the phosphate-binding proteins from Pho regulon of Xanthomonas citri

Vanessa R. Pegos, Rodrigo M. L. Santos, Francisco J. Medrano, Andrea Balan

Characteristics of candidate genes associated with embryonic development in the cow: Evidence for a role for WBP1 in development to the blastocyst stage

M. Sofia Ortega, Justin J. Kurian, Robert McKenna, Peter J. Hansen

Fully automated antibody structure prediction using BIOVIA tools: Validation study

Helen Kemmish, Marc Fasnacht, Lisa Yan

CorNet: Assigning function to networks of co-evolving residues by automated literature mining

Tom van den Bergh, Giorgio Tamo, [ ... ], Henk-Jan Joosten

Computational prediction of the tolerance to amino-acid deletion in green-fluorescent protein

Eleisha L. Jackson, Stephanie J. Spielman, Claus O. Wilke

A pair-conformation-dependent scoring function for evaluating 3D RNA-protein complex structures

Haotian Li, Yangyu Huang, Yi Xiao

Genomic variants reveal differential evolutionary constraints on human transglutaminases and point towards unrecognized significance of transglutaminase 2

Kiruphagaran Thangaraju, Róbert Király, [ ... ], László Fésüs

Chemogenomics driven discovery of endogenous polyketide anti-infective compounds from endosymbiotic Emericella variecolor CLB38 and their RNA secondary structure analysis

H. C. Yashavantha Rao, Devaraju Rakshith, [ ... ], Sreedharamurthy Satish

Waterdock 2.0: Water placement prediction for Holo-structures with a pymol plugin

Akshay Sridhar, Gregory A. Ross, Philip C. Biggin

Rational design of DKK3 structure-based small peptides as antagonists of Wnt signaling pathway and in silico evaluation of their efficiency

Mansour Poorebrahim, Solmaz Sadeghi, [ ... ], Ladan Teimoori-Toolabi

The scoring bias in reverse docking and the score normalization strategy to improve success rate of target fishing

Qiyao Luo, Liang Zhao, [ ... ], Liangren Zhang

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