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Protein structure prediction

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

Jack Holland, Qinxin Pan, Gevorg Grigoryan

In silico and in vitro analysis of boAP3d1 protein interaction with bovine leukaemia virus gp51

Adriana Patricia Corredor, Janneth González, [ ... ], María Fernanda Gutiérrez

Predicting human protein function with multi-task deep neural networks

Rui Fa, Domenico Cozzetto, Cen Wan, David T. Jones

Structures, dynamics, and hydrogen-bond interactions of antifreeze proteins in TIP4P/Ice water and their dependence on force fields

Hwankyu Lee

Investigation of protein quaternary structure via stoichiometry and symmetry ınformation

Selcuk Korkmaz, Jose M. Duarte, [ ... ], Peter W. Rose

Positions 299 and 302 of the GerAA subunit are important for function of the GerA spore germination receptor in Bacillus subtilis

Anna Grela, Inga Jamrożek, [ ... ], Michał Obuchowski

Protein alignment based on higher order conditional random fields for template-based modeling

Juan A. Morales-Cordovilla, Victoria Sanchez, Martin Ratajczak

Tailoring the specificity of the type C feruloyl esterase FoFaeC from Fusarium oxysporum towards methyl sinapate by rational redesign based on small molecule docking simulations

Io Antonopoulou, Cameron Hunt, [ ... ], Paul Christakopoulos

ENTPRISE-X: Predicting disease-associated frameshift and nonsense mutations

Hongyi Zhou, Mu Gao, Jeffrey Skolnick

Polymorphism in merozoite surface protein-7E of Plasmodium vivax in Thailand: Natural selection related to protein secondary structure

Chew Weng Cheng, Chaturong Putaporntip, Somchai Jongwutiwes

Accurate prediction of functional, structural, and stability changes in PITX2 mutations using in silico bioinformatics algorithms

Morteza Seifi, Michael A. Walter

Application of alignment-free bioinformatics methods to identify an oomycete protein with structural and functional similarity to the bacterial AvrE effector protein

Devdutta Deb, David Mackey, Stephen O. Opiyo, John M. McDowell

Solution scattering study of the Bacillus subtilis PgdS enzyme involved in poly-γ-glutamic acids degradation

Jumei Zeng, Yun Jin, Zhongchuan Liu

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