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Protein structure prediction

Perturbation of BRMS1 interactome reveals pathways that impact metastasis

Rosalyn C. Zimmermann, Mihaela E. Sardiu, [ ... ], Danny R. Welch

A resource for improved predictions of Trypanosoma and Leishmania protein three-dimensional structure

Richard John Wheeler

Computational and structural based approach to identify malignant nonsynonymous single nucleotide polymorphisms associated with CDK4 gene

Rahatul Islam, Mashiur Rahaman, [ ... ], Nurnabi Azad Jewel

Rational design of chimeric Multiepitope Based Vaccine (MEBV) against human T-cell lymphotropic virus type 1: An integrated vaccine informatics and molecular docking based approach

Muhammad Hamza Tariq, Rashid Bhatti, [ ... ], Mohsin Khurshid

Investigating single amino acid substitutions in PIM1 kinase: A structural genomics approach

Alaa Shafie, Shama Khan, [ ... ], Md. Imtaiyaz Hassan

Predicting drug targets by homology modelling of Pseudomonas aeruginosa proteins of unknown function

Nikolina Babic, Filip Kovacic

Phylogenetic analyses, protein modeling and active site prediction of two pathogenesis related (PR2 and PR3) genes from bread wheat

Muhammad Numan, Shazia Anwer Bukhari, [ ... ], Bushra Sadia

Differentiable molecular simulation can learn all the parameters in a coarse-grained force field for proteins

Joe G. Greener, David T. Jones

Rosetta:MSF:NN: Boosting performance of multi-state computational protein design with a neural network

Julian Nazet, Elmar Lang, Rainer Merkl

Interactome analysis of Bag-1 isoforms reveals novel interaction partners in endoplasmic reticulum-associated degradation

Nisan Denizce Can, Ezgi Basturk, [ ... ], Gizem Dinler Doganay

A secondary structure-based position-specific scoring matrix applied to the improvement in protein secondary structure prediction

Teng-Ruei Chen, Sheng-Hung Juan, [ ... ], Wei-Cheng Lo

The influence of dataset homology and a rigorous evaluation strategy on protein secondary structure prediction

Teng-Ruei Chen, Chia-Hua Lo, Sheng-Hung Juan, Wei-Cheng Lo

Predicting aptamer sequences that interact with target proteins using an aptamer-protein interaction classifier and a Monte Carlo tree search approach

Gwangho Lee, Gun Hyuk Jang, Ho Young Kang, Giltae Song

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