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Phylogenetic analysis

Mitochondrial Phylogeography Illuminates the Origin of the Extinct Caspian Tiger and Its Relationship to the Amur Tiger

Carlos A. Driscoll, Nobuyuki Yamaguchi, [ ... ], Stephen J. O'Brien

An Unusual New Theropod with a Didactyl Manus from the Upper Cretaceous of Patagonia, Argentina

Sebastián Apesteguía, Nathan D. Smith, Rubén Juárez Valieri, Peter J. Makovicky

Dysbiosis in the Gut Microbiota of Patients with Multiple Sclerosis, with a Striking Depletion of Species Belonging to Clostridia XIVa and IV Clusters

Sachiko Miyake, Sangwan Kim, [ ... ], Takashi Yamamura

Iterative Evolution of Sympatric Seacow (Dugongidae, Sirenia) Assemblages during the Past ∼26 Million Years

Jorge Velez-Juarbe, Daryl P. Domning, Nicholas D. Pyenson

NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Morten Nielsen, Claus Lundegaard, [ ... ], Søren Buus

Evolution of the Toxins Muscarine and Psilocybin in a Family of Mushroom-Forming Fungi

Pawel Kosentka, Sarah L. Sprague, [ ... ], P. Brandon Matheny

The Origin and Genetic Variation of Domestic Chickens with Special Reference to Junglefowls Gallus g. gallus and G. varius

Hiromi Sawai, Hie Lim Kim, [ ... ], Fumihito Akishinonomiya

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

Daniel L. Rabosky

Cthulhu Macrofasciculumque n. g., n. sp. and Cthylla Microfasciculumque n. g., n. sp., a Newly Identified Lineage of Parabasalian Termite Symbionts

Erick R. James, Noriko Okamoto, [ ... ], Patrick J. Keeling

Linguistic Diversity and Traffic Accidents: Lessons from Statistical Studies of Cultural Traits

Seán Roberts, James Winters

Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria

Sujatha Srinivasan, Noah G. Hoffman, [ ... ], David N. Fredricks

Repeated Origin and Loss of Adhesive Toepads in Geckos

Tony Gamble, Eli Greenbaum, [ ... ], Aaron M. Bauer

The Species Identity of the Widely Cultivated Ganoderma, ‘G. lucidum’ (Ling-zhi), in China

Xin-Cun Wang, Rui-Jiao Xi, [ ... ], Yi-Jian Yao

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