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Nucleotide sequencing

A culture-independent nucleic acid diagnostics method for use in the detection and quantification of Burkholderia cepacia complex contamination in aqueous finished pharmaceutical products

Huong Duong, Elizabeth Minogue, Shannon Fullbrook, Thomas Barry, Kate Reddington

published 16 May 2024

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A hepatitis B virus (HBV) sequence variation graph improves alignment and sample-specific consensus sequence construction

Dylan Duchen, Steven J. Clipman, Candelaria Vergara, Chloe L. Thio, David L. Thomas, Priya Duggal, Genevieve L. Wojcik

published 26 Apr 2024

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Molecular epidemiological study of Scrub Typhus in residence, farm and forest habitats from Yunnan Province, China

Jia-Wei Tian, Yi-Chen Kong, Pei-Yu Han, Fen-Hui Xu, Wei-Hong Yang, Yun-Zhi Zhang

published 16 Apr 2024

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Genetic diversity and phylogeographic patterns of the peacock jewel-damselfly, Rhinocypha fenestrella (Rambur, 1842)

Mamat Noorhidayah, Noor Azrizal-Wahid, Van Lun Low, Norma-Rashid Yusoff

published 05 Apr 2024

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Mottle: Accurate pairwise substitution distance at high divergence through the exploitation of short-read mappers and gradient descent

Alisa Prusokiene, Neil Boonham, Adrian Fox, Thomas P. Howard

published 21 Mar 2024

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JUN mRNA translation regulation is mediated by multiple 5’ UTR and start codon features

Angélica M. González-Sánchez, Eimy A. Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H. D. Cate

published 14 Mar 2024

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HaplotagLR: An efficient and configurable utility for haplotagging long reads

Monica J. Holmes, Babak Mahjour, Christopher P. Castro, Gregory A. Farnum, Adam G. Diehl, Alan P. Boyle

published 13 Mar 2024

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Otariid gammaherpesvirus 1 in South American fur seals (Arctocephalus australis) and a novel related herpesvirus in free-ranging South American sea lions (Otaria byronia): Prevalence and effects of age, sex, and sample type

Karisa N. Tang, Michael J. Adkesson, Susana Cárdenas-Alayza, Laura Adamovicz, Alissa C. Deming, James F. X. Wellehan, April Childress, Galaxia Cortes-Hinojosa, Kathleen Colegrove, Jennifer N. Langan, Matthew C. Allender

published 06 Mar 2024

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New insights on mcr-1-harboring plasmids from human clinical Escherichia coli isolates

Florencia Martino, Alejandro Petroni, María Alejandra Menocal, Alejandra Corso, Roberto Melano, Diego Faccone

published 26 Feb 2024

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Identification of self-incompatibility alleles in Quince (Cydonia oblonga Mill.)

Sara Sadeghnejad, Hamid Abdollahi, Daryoush Davoodi, Maryam Tatari, Mahmoud Khosroshahli

published 08 Feb 2024

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Phylogenetic characterisation of tick-borne encephalitis virus from Lithuania

Marina Sidorenko, Jana Radzijevskaja, Saulius Mickevičius, Maksim Bratchikov, Dalytė Mardosaitė-Busaitienė, Povilas Sakalauskas, Algimantas Paulauskas

published 07 Feb 2024

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Comparative analysis of chloroplast genomes of seven Juniperus species from Kazakhstan

Shyryn Almerekova, Moldir Yermagambetova, Smatulla Jumanov, Saule Abugalieva, Yerlan Turuspekov

published 25 Jan 2024

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Machine learning-based approach KEVOLVE efficiently identifies SARS-CoV-2 variant-specific genomic signatures

Dylan Lebatteux, Hugo Soudeyns, Isabelle Boucoiran, Soren Gantt, Abdoulaye Baniré Diallo

published 19 Jan 2024

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