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Nucleotide mapping

Unraveling the mechanism of recognition of the 3’ splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60

Hsin-hao T. Hsiao, Gregg V. Crichlow, James W. Murphy, Ewa J. Folta-Stogniew, Elias J. Lolis, Demetrios T. Braddock

published 30 Nov 2020

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Vertical lossless genomic data compression tools for assembled genomes: A systematic literature review

Kelvin V. Kredens, Juliano V. Martins, Osmar B. Dordal, Mauri Ferrandin, Roberto H. Herai, Edson E. Scalabrin, Bráulio C. Ávila

published 26 May 2020

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Combining signal and sequence to detect RNA polymerase initiation in ATAC-seq data

Ignacio J. Tripodi, Murad Chowdhury, Margaret Gruca, Robin D. Dowell

published 30 Apr 2020

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Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1

Jeffrey W. Mercante, Jason A. Caravas, Maliha K. Ishaq, Natalia A. Kozak-Muiznieks, Brian H. Raphael, Jonas M. Winchell

published 18 Oct 2018

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Development of a quantitative pachytene chromosome map and its unification with somatic chromosome and linkage maps of rice (Oryza sativa L.)

Nobuko Ohmido, Aiko Iwata, Seiji Kato, Toshiyuki Wako, Kiichi Fukui

published 19 Apr 2018

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The effects of sampling on the efficiency and accuracy of k−mer indexes: Theoretical and empirical comparisons using the human genome

Meznah Almutairy, Eric Torng

published 07 Jul 2017

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MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads

Thomas Nordahl Petersen, Oksana Lukjancenko, Martin Christen Frølund Thomsen, Maria Maddalena Sperotto, Ole Lund, Frank Møller Aarestrup, Thomas Sicheritz-Pontén

published 03 May 2017

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On DNA numerical representations for genomic similarity computation

Gerardo Mendizabal-Ruiz, Israel Román-Godínez, Sulema Torres-Ramos, Ricardo A. Salido-Ruiz, J. Alejandro Morales

published 21 Mar 2017

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A Chromosome 7 Pericentric Inversion Defined at Single-Nucleotide Resolution Using Diagnostic Whole Genome Sequencing in a Patient with Hand-Foot-Genital Syndrome

Christopher M. Watson, Laura A. Crinnion, Sally M. Harrison, Carolina Lascelles, Agne Antanaviciute, Ian M. Carr, David T. Bonthron, Eamonn Sheridan

published 07 Jun 2016

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Sticky Genomes: Using NGS Evidence to Test Hybrid Speciation Hypotheses

Mary Morgan-Richards, Simon F. K. Hills, Patrick J. Biggs, Steven A. Trewick

published 17 May 2016

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A Next-Generation Sequencing Data Analysis Pipeline for Detecting Unknown Pathogens from Mixed Clinical Samples and Revealing Their Genetic Diversity

Yu-Nong Gong, Guang-Wu Chen, Shu-Li Yang, Ching-Ju Lee, Shin-Ru Shih, Kuo-Chien Tsao

published 17 Mar 2016

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Integrated Taxonomy and DNA Barcoding of Alpine Midges (Diptera: Chironomidae)

Matteo Montagna, Valeria Mereghetti, Valeria Lencioni, Bruno Rossaro

published 03 Mar 2016

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Self-Folding of Naked Segment 8 Genomic RNA of Influenza A Virus

Elzbieta Lenartowicz, Julita Kesy, Agnieszka Ruszkowska, Marta Soszynska-Jozwiak, Paula Michalak, Walter N. Moss, Douglas H. Turner, Ryszard Kierzek, Elzbieta Kierzek

published 05 Feb 2016

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