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Next-generation sequencing

A model for isoform-level differential expression analysis using RNA-seq data without pre-specifying isoform structure

Yang Liu, Junying Wang, Song Wu, Jie Yang

published 16 May 2022

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A sheet pocket to prevent cross-contamination of formalin-fixed paraffin-embedded block for application in next generation sequencing

Keiichi Iwaya, Hisae Arai, Nanao Takatou, Yuka Morita, Rinko Ozeki, Hirofumi Nakaoka, Masaru Sakamoto, Tsutomu Kouno, Masayoshi Soma

published 04 May 2022

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Whole genome sequencing of SARS-CoV2 strains circulating in Iran during five waves of pandemic

Jila Yavarian, Ahmad Nejati, Vahid Salimi, Nazanin Zahra Shafiei Jandaghi, Kaveh Sadeghi, Adel Abedi, Ali Sharifi Zarchi, Mohammad Mehdi Gouya, Talat Mokhtari-Azad

published 02 May 2022

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Development and evaluation of ActSeq: A targeted next-generation sequencing panel for clinical oncology use

Zonggao Shi, Jacqueline Lopez, William Kalliney, Bobbie Sutton, Joyce Simpson, Kevin Maggert, Sheng Liu, Jun Wan, M. Sharon Stack

published 21 Apr 2022

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Non-invasive prenatal paternity testing by analysis of Y-chromosome mini-STR haplotype using next-generation sequencing

Wenqian Song, Nan Xiao, Shihang Zhou, Weijian Yu, Ni Wang, Linnan Shao, Ying Duan, Mei Chen, Lingzi Pan, Yuexin Xia, Li Zhang, Ming Liu

published 01 Apr 2022

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Implementation of a COVID-19 Genomic Surveillance Regional Network for Latin America and Caribbean region

Juliana Almeida Leite, Andrea Vicari, Enrique Perez, Marilda Siqueira, Paola Resende, Fernando Couto Motta, Lucas Freitas, Jorge Fernandez, Barbara Parra, Andrés Castillo, Rodrigo Fasce, Alexander Augusto Martinez Caballero, COVID-19 Genomic Surveillance Regional Network , Lionel Gresh, Sylvain Aldighieri, Jean-Marc Gabastou, Leticia Franco, Jairo Mendez-Rico

published 03 Mar 2022

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Detection of EGFR mutations in non-small cell lung cancer by droplet digital PCR

Drew F. K. Williamson, Sean R. N. Marris, Vanesa Rojas-Rudilla, Jacqueline L. Bruce, Cloud P. Paweletz, Geoffrey R. Oxnard, Lynette M. Sholl, Fei Dong

published 24 Feb 2022

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Cryptic MYC insertions in Burkitt lymphoma: New data and a review of the literature

Renata Woroniecka, Grzegorz Rymkiewicz, Lukasz M. Szafron, Katarzyna Blachnio, Laura A. Szafron, Zbigniew Bystydzienski, Barbara Pienkowska-Grela, Klaudia Borkowska, Jolanta Rygier, Aleksandra Kotyl, Natalia Malawska, Katarzyna Wojtkowska, Joanna Parada, Anita Borysiuk, Victor Murcia Pienkowski, Malgorzata Rydzanicz, Beata Grygalewicz

published 15 Feb 2022

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Tracking ebolavirus genomic drift with a resequencing microarray

Irina Tiper, Moussa Kourout, Bryan Lanning, Carolyn Fisher, Krishnamurthy Konduru, Anjan Purkayastha, Gerardo Kaplan, Robert Duncan

published 10 Feb 2022

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Comparison of seven SNP calling pipelines for the next-generation sequencing data of chickens

Jing Liu, Qingmiao Shen, Haigang Bao

published 31 Jan 2022

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Identification of pharmacogenetic variants from large scale next generation sequencing data in the Saudi population

Ewa Goljan, Mohammed Abouelhoda, Mohamed M. ElKalioby, Amjad Jabaan, Nada Alghithi, Brian F. Meyer, Dorota Monies

published 28 Jan 2022

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NGS read classification using AI

Benjamin Voigt, Oliver Fischer, Christian Krumnow, Christian Herta, Piotr Wojciech Dabrowski

published 22 Dec 2021

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CRISPR/Cas9-mediated generation of biallelic F0 anemonefish (Amphiprion ocellaris) mutants

Laurie J. Mitchell, Valerio Tettamanti, Justin S. Rhodes, N. Justin Marshall, Karen L. Cheney, Fabio Cortesi

published 15 Dec 2021

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