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Next-generation sequencing

Resources and Costs for Microbial Sequence Analysis Evaluated Using Virtual Machines and Cloud Computing

Samuel V. Angiuoli, James R. White, [ ... ], W. Florian Fricke

Exome sequencing covers >98% of mutations identified on targeted next generation sequencing panels

Holly LaDuca, Kelly D. Farwell, [ ... ], Elizabeth C. Chao

Customisation of the Exome Data Analysis Pipeline Using a Combinatorial Approach

Swetansu Pattnaik, Srividya Vaidyanathan, [ ... ], Binay Panda

Next Generation Sequencing Provides Rapid Access to the Genome of Puccinia striiformis f. sp. tritici, the Causal Agent of Wheat Stripe Rust

Dario Cantu, Manjula Govindarajulu, [ ... ], Jorge Dubcovsky

Bisulfite Conversion of DNA: Performance Comparison of Different Kits and Methylation Quantitation of Epigenetic Biomarkers that Have the Potential to Be Used in Non-Invasive Prenatal Testing

Chrysanthia A. Leontiou, Michael D. Hadjidaniel, [ ... ], Philippos C. Patsalis

Pros and Cons of Ion-Torrent Next Generation Sequencing versus Terminal Restriction Fragment Length Polymorphism T-RFLP for Studying the Rumen Bacterial Community

Gabriel de la Fuente, Alejandro Belanche, [ ... ], C. Jamie Newbold

CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes

Shin-Hung Lin, Yu-Chieh Liao

Improving Indel Detection Specificity of the Ion Torrent PGM Benchtop Sequencer

Zhen Xuan Yeo, Maurice Chan, [ ... ], Ann Siew Gek Lee

BG7: A New Approach for Bacterial Genome Annotation Designed for Next Generation Sequencing Data

Pablo Pareja-Tobes, Marina Manrique, [ ... ], Raquel Tobes

RNA-Seq vs Dual- and Single-Channel Microarray Data: Sensitivity Analysis for Differential Expression and Clustering

Alina Sîrbu, Gráinne Kerr, Martin Crane, Heather J. Ruskin

Detection of Invasive Mosquito Vectors Using Environmental DNA (eDNA) from Water Samples

Judith Schneider, Alice Valentini, [ ... ], Luca Fumagalli

Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

Schraga Schwartz, Ram Oren, Gil Ast

Systematic Evaluation of Three microRNA Profiling Platforms: Microarray, Beads Array, and Quantitative Real-Time PCR Array

Bin Wang, Paul Howel, [ ... ], Yaguang Xi

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