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Next-generation sequencing

IQSeq: Integrated Isoform Quantification Analysis Based on Next-Generation Sequencing

Jiang Du, Jing Leng, Lukas Habegger, Andrea Sboner, Drew McDermott, Mark Gerstein

published 06 Jan 2012

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Probing the SELEX Process with Next-Generation Sequencing

Tatjana Schütze, Barbara Wilhelm, Nicole Greiner, Hannsjörg Braun, Franziska Peter, Mario Mörl, Volker A. Erdmann, Hans Lehrach, Zoltán Konthur, Marcus Menger, Peter F. Arndt, Jörn Glökler

published 29 Dec 2011

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Identification of Sequence Variants in Genetic Disease-Causing Genes Using Targeted Next-Generation Sequencing

Xiaoming Wei, Xiangchun Ju, Xin Yi, Qian Zhu, Ning Qu, Tengfei Liu, Yang Chen, Hui Jiang, Guanghui Yang, Ruan Zhen, Zhangzhang Lan, Ming Qi, Jinming Wang, Yi Yang, Yuxing Chu, Xiaoyan Li, Yanfang Guang, Jian Huang

published 21 Dec 2011

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A Viral Discovery Methodology for Clinical Biopsy Samples Utilising Massively Parallel Next Generation Sequencing

Gordon M. Daly, Nick Bexfield, Judith Heaney, Sam Stubbs, Antonia P. Mayer, Anne Palser, Paul Kellam, Nizar Drou, Mario Caccamo, Laurence Tiley, Graeme J. M. Alexander, William Bernal, Jonathan L. Heeney

published 21 Dec 2011

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Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

Patrick D. Schloss, Dirk Gevers, Sarah L. Westcott

published 14 Dec 2011

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Systematic Comparison of Three Methods for Fragmentation of Long-Range PCR Products for Next Generation Sequencing

Ellen Knierim, Barbara Lucke, Jana Marie Schwarz, Markus Schuelke, Dominik Seelow

published 30 Nov 2011

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Fast and Cost-Effective Mining of Microsatellite Markers Using NGS Technology: An Example of a Korean Water Deer Hydropotes inermis argyropus

Jeong-Nam Yu, Changman Won, Jumin Jun, YoungWoon Lim, Myounghai Kwak

published 01 Nov 2011

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Resources and Costs for Microbial Sequence Analysis Evaluated Using Virtual Machines and Cloud Computing

Samuel V. Angiuoli, James R. White, Malcolm Matalka, Owen White, W. Florian Fricke

published 19 Oct 2011

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ConDeTri - A Content Dependent Read Trimmer for Illumina Data

Linnéa Smeds, Axel Künstner

published 19 Oct 2011

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Expression Profiling without Genome Sequence Information in a Non-Model Species, Pandalid Shrimp (Pandalus latirostris), by Next-Generation Sequencing

Ryouka Kawahara-Miki, Kenta Wada, Noriko Azuma, Susumu Chiba

published 10 Oct 2011

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Next Generation Sequencing Provides Rapid Access to the Genome of Puccinia striiformis f. sp. tritici, the Causal Agent of Wheat Stripe Rust

Dario Cantu, Manjula Govindarajulu, Alex Kozik, Meinan Wang, Xianming Chen, Kenji K. Kojima, Jerzy Jurka, Richard W. Michelmore, Jorge Dubcovsky

published 31 Aug 2011

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LOCAS – A Low Coverage Assembly Tool for Resequencing Projects

Juliane D. Klein, Stephan Ossowski, Korbinian Schneeberger, Detlef Weigel, Daniel H. Huson

published 15 Aug 2011

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Differential Gene Expression in the Siphonophore Nanomia bijuga (Cnidaria) Assessed with Multiple Next-Generation Sequencing Workflows

Stefan Siebert, Mark D. Robinson, Sophia C. Tintori, Freya Goetz, Rebecca R. Helm, Stephen A. Smith, Nathan Shaner, Steven H. D. Haddock, Casey W. Dunn

published 29 Jul 2011

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