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Next-generation sequencing

BG7: A New Approach for Bacterial Genome Annotation Designed for Next Generation Sequencing Data

Pablo Pareja-Tobes, Marina Manrique, Eduardo Pareja-Tobes, Eduardo Pareja, Raquel Tobes

published 21 Nov 2012

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Use of Four Next-Generation Sequencing Platforms to Determine HIV-1 Coreceptor Tropism

John Archer, Jan Weber, Kenneth Henry, Dane Winner, Richard Gibson, Lawrence Lee, Ellen Paxinos, Eric J. Arts, David L. Robertson, Larry Mimms, Miguel E. Quiñones-Mateu

published 14 Nov 2012

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Generation of Artificial FASTQ Files to Evaluate the Performance of Next-Generation Sequencing Pipelines

Matthew Frampton, Richard Houlston

published 12 Nov 2012

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Next-Generation cDNA Screening for Oncogene and Resistance Phenotypes

Nobuaki Shindoh, Akinori Yoda, Yuka Yoda, Timothy J. Sullivan, Oliver Weigert, Andrew A. Lane, Nadja Kopp, Liat Bird, Scott J. Rodig, Edward A. Fox, David M. Weinstock

published 07 Nov 2012

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Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius

Marino Marinković, Wim C. de Leeuw, Mark de Jong, Michiel H. S. Kraak, Wim Admiraal, Timo M. Breit, Martijs J. Jonker

published 25 Oct 2012

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lociNGS: A Lightweight Alternative for Assessing Suitability of Next-Generation Loci for Evolutionary Analysis

Sarah M. Hird

published 10 Oct 2012

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miR-BAG: Bagging Based Identification of MicroRNA Precursors

Ashwani Jha, Rohit Chauhan, Mrigaya Mehra, Heikham Russiachand Singh, Ravi Shankar

published 25 Sep 2012

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Improving Indel Detection Specificity of the Ion Torrent PGM Benchtop Sequencer

Zhen Xuan Yeo, Maurice Chan, Yoon Sim Yap, Peter Ang, Steve Rozen, Ann Siew Gek Lee

published 19 Sep 2012

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Molecular Diagnosis of Usher Syndrome: Application of Two Different Next Generation Sequencing-Based Procedures

Danilo Licastro, Margherita Mutarelli, Ivana Peluso, Kornelia Neveling, Nienke Wieskamp, Rossella Rispoli, Diego Vozzi, Emmanouil Athanasakis, Angela D'Eustacchio, Mariateresa Pizzo, Francesca D'Amico, Carmela Ziviello, Francesca Simonelli, Antonella Fabretto, Hans Scheffer, Paolo Gasparini, Sandro Banfi, Vincenzo Nigro

published 29 Aug 2012

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A Deletion in the Bovine FANCI Gene Compromises Fertility by Causing Fetal Death and Brachyspina

Carole Charlier, Jorgen Steen Agerholm, Wouter Coppieters, Peter Karlskov-Mortensen, Wanbo Li, Gerben de Jong, Corinne Fasquelle, Latifa Karim, Susanna Cirera, Nadine Cambisano, Naima Ahariz, Erik Mullaart, Michel Georges, Merete Fredholm

published 29 Aug 2012

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Transferring the Characteristics of Naturally Occurring and Biased Antibody Repertoires to Human Antibody Libraries by Trapping CDRH3 Sequences

Sophie Venet, Ulla Ravn, Vanessa Buatois, Franck Gueneau, Sébastien Calloud, Marie Kosco-Vilbois, Nicolas Fischer

published 24 Aug 2012

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An Improved Protocol for Sequencing of Repetitive Genomic Regions and Structural Variations Using Mutagenesis and Next Generation Sequencing

Botond Sipos, Tim Massingham, Adrian M. Stütz, Nick Goldman

published 17 Aug 2012

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Mutation Discovery in Regions of Segmental Cancer Genome Amplifications with CoNAn-SNV: A Mixture Model for Next Generation Sequencing of Tumors

Anamaria Crisan, Rodrigo Goya, Gavin Ha, Jiarui Ding, Leah M. Prentice, Arusha Oloumi, Janine Senz, Thomas Zeng, Kane Tse, Allen Delaney, Marco A. Marra, David G. Huntsman, Martin Hirst, Sam Aparicio, Sohrab Shah

published 16 Aug 2012

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