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Next-generation sequencing

Genome-Wide DNA Polymorphisms in Seven Rice Cultivars of Temperate and Tropical Japonica Groups

Yuko Arai-Kichise, Yuh Shiwa, [ ... ], Kyo Wakasa

Scrutinizing Virus Genome Termini by High-Throughput Sequencing

Shasha Li, Hang Fan, [ ... ], Yigang Tong

Rare Variant Association Testing by Adaptive Combination of P-values

Wan-Yu Lin, Xiang-Yang Lou, Guimin Gao, Nianjun Liu

Outlier-Based Identification of Copy Number Variations Using Targeted Resequencing in a Small Cohort of Patients with Tetralogy of Fallot

Vikas Bansal, Cornelia Dorn, [ ... ], Silke R. Sperling

Comparison of Metatranscriptomic Samples Based on k-Tuple Frequencies

Ying Wang, Lin Liu, [ ... ], Fengzhu Sun

An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis

Cristian Del Fabbro, Simone Scalabrin, Michele Morgante, Federico M. Giorgi

Next-Generation Sequencing of Lung Cancer EGFR Exons 18-21 Allows Effective Molecular Diagnosis of Small Routine Samples (Cytology and Biopsy)

Dario de Biase, Michela Visani, [ ... ], Giovanni Tallini

Inferring Short-Range Linkage Information from Sequencing Chromatograms

Bastian Beggel, Maria Neumann-Fraune, [ ... ], Thomas Lengauer

SoftSearch: Integration of Multiple Sequence Features to Identify Breakpoints of Structural Variations

Steven N. Hart, Vivekananda Sarangi, [ ... ], Jean-Pierre A. Kocher

Ion Torrent PGM as Tool for Fungal Community Analysis: A Case Study of Endophytes in Eucalyptus grandis Reveals High Taxonomic Diversity

Martin Kemler, Jeff Garnas, [ ... ], Bernard Slippers

SRComp: Short Read Sequence Compression Using Burstsort and Elias Omega Coding

Jeremy John Selva, Xin Chen

RNA-Seq Transcriptome Profiling of Upland Cotton (Gossypium hirsutum L.) Root Tissue under Water-Deficit Stress

Megan J. Bowman, Wonkeun Park, [ ... ], B. Todd Campbell

Genomic DNA Enrichment Using Sequence Capture Microarrays: a Novel Approach to Discover Sequence Nucleotide Polymorphisms (SNP) in Brassica napus L

Wayne E. Clarke, Isobel A. Parkin, [ ... ], Federico L. Iniguez-Luy

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