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Next-generation sequencing

Analysis of Transposable Elements in the Genome of Asparagus officinalis from High Coverage Sequence Data

Shu-Fen Li, Wu-Jun Gao, Xin-Peng Zhao, Tian-Yu Dong, Chuan-Liang Deng, Long-Dou Lu

published 08 May 2014

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A Method Enabling High-Throughput Sequencing of Human Cytomegalovirus Complete Genomes from Clinical Isolates

Steven Sijmons, Kim Thys, Michaël Corthout, Ellen Van Damme, Marnix Van Loock, Stefanie Bollen, Sylvie Baguet, Jeroen Aerssens, Marc Van Ranst, Piet Maes

published 22 Apr 2014

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FANSe2: A Robust and Cost-Efficient Alignment Tool for Quantitative Next-Generation Sequencing Applications

Chuan-Le Xiao, Zhi-Biao Mai, Xin-Lei Lian, Jia-Yong Zhong, Jing-jie Jin, Qing-Yu He, Gong Zhang

published 17 Apr 2014

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Deep-Sequencing Method for Quantifying Background Abundances of Symbiodinium Types: Exploring the Rare Symbiodinium Biosphere in Reef-Building Corals

Kate M. Quigley, Sarah W. Davies, Carly D. Kenkel, Bette L. Willis, Mikhail V. Matz, Line K. Bay

published 11 Apr 2014

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A Two-Dimensional Pooling Strategy for Rare Variant Detection on Next-Generation Sequencing Platforms

Philip C. Zuzarte, Robert E. Denroche, Gordon Fehringer, Hagit Katzov-Eckert, Rayjean J. Hung, John D. McPherson

published 11 Apr 2014

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Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing

Myung-Chul Kim, Seung-Woo Lee, Doug-Young Ryu, Feng-Ji Cui, Jong Bhak, Yongbaek Kim

published 02 Apr 2014

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Next Generation MUT-MAP, a High-Sensitivity High-Throughput Microfluidics Chip-Based Mutation Analysis Panel

Erica B. Schleifman, Rachel Tam, Rajesh Patel, Alison Tsan, Teiko Sumiyoshi, Ling Fu, Rupal Desai, Nancy Schoenbrunner, Thomas W. Myers, Keith Bauer, Edward Smith, Rajiv Raja

published 21 Mar 2014

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Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

Dylan P. Smith, Kabir G. Peay

published 28 Feb 2014

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Use of Sequenom Sample ID Plus® SNP Genotyping in Identification of FFPE Tumor Samples

Jessica K. Miller, Nicholas Buchner, Lee Timms, Shirley Tam, Xuemei Luo, Andrew M. K. Brown, Danielle Pasternack, Robert G. Bristow, Michael Fraser, Paul C. Boutros, John D. McPherson

published 13 Feb 2014

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Next Generation Sequencing Improves the Accuracy of KRAS Mutation Analysis in Endoscopic Ultrasound Fine Needle Aspiration Pancreatic Lesions

Dario de Biase, Michela Visani, Paola Baccarini, Anna Maria Polifemo, Antonella Maimone, Adele Fornelli, Adriana Giuliani, Nicola Zanini, Carlo Fabbri, Annalisa Pession, Giovanni Tallini

published 04 Feb 2014

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SNP Discovery in the Transcriptome of White Pacific Shrimp Litopenaeus vannamei by Next Generation Sequencing

Yang Yu, Jiankai Wei, Xiaojun Zhang, Jingwen Liu, Chengzhang Liu, Fuhua Li, Jianhai Xiang

published 30 Jan 2014

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Comprehensive Analysis to Improve the Validation Rate for Single Nucleotide Variants Detected by Next-Generation Sequencing

Mi-Hyun Park, Hwanseok Rhee, Jung Hoon Park, Hae-Mi Woo, Byung-Ok Choi, Bo-Young Kim, Ki Wha Chung, Yoo-Bok Cho, Hyung Jin Kim, Ji-Won Jung, Soo Kyung Koo

published 29 Jan 2014

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Genome-Wide DNA Polymorphisms in Seven Rice Cultivars of Temperate and Tropical Japonica Groups

Yuko Arai-Kichise, Yuh Shiwa, Kaworu Ebana, Mari Shibata-Hatta, Hirofumi Yoshikawa, Masahiro Yano, Kyo Wakasa

published 21 Jan 2014

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