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Next-generation sequencing

GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers

Sebastian Jünemann, Karola Prior, [ ... ], Dag Harmsen

Application of Multi-Objective Optimization to Pooled Experiments of Next Generation Sequencing for Detection of Rare Mutations

Julius Žilinskas, Algirdas Lančinskas, Mario Rosario Guarracino

Acute Effects of TiO₂ Nanomaterials on the Viability and Taxonomic Composition of Aquatic Bacterial Communities Assessed via High-Throughput Screening and Next Generation Sequencing

Chu Thi Thanh Binh, Tiezheng Tong, [ ... ], John J. Kelly

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

Shunsuke Takahashi, Junko Tomita, [ ... ], Miyuki Nishijima

Assessment of EGFR Mutations in Circulating Tumor Cell Preparations from NSCLC Patients by Next Generation Sequencing: Toward a Real-Time Liquid Biopsy for Treatment

Antonio Marchetti, Maela Del Grammastro, [ ... ], Fiamma Buttitta

Targeted Next-Generation Sequencing Reveals Novel USH2A Mutations Associated with Diverse Disease Phenotypes: Implications for Clinical and Molecular Diagnosis

Xue Chen, Xunlun Sheng, [ ... ], Chen Zhao

Mutation Screening of Retinal Dystrophy Patients by Targeted Capture from Tagged Pooled DNAs and Next Generation Sequencing

Christopher M. Watson, Mohammed El-Asrag, [ ... ], Manir Ali

Assessment of Species Diversity and Distribution of an Ancient Diatom Lineage Using a DNA Metabarcoding Approach

Deepak Nanjappa, Stephane Audic, [ ... ], Adriana Zingone

Plant Virology and Next Generation Sequencing: Experiences with a Potyvirus

Monica A. Kehoe, Brenda A. Coutts, Bevan J. Buirchell, Roger A. C. Jones

Pros and Cons of Ion-Torrent Next Generation Sequencing versus Terminal Restriction Fragment Length Polymorphism T-RFLP for Studying the Rumen Bacterial Community

Gabriel de la Fuente, Alejandro Belanche, [ ... ], C. Jamie Newbold

Stepwise Threshold Clustering: A New Method for Genotyping MHC Loci Using Next-Generation Sequencing Technology

William E. Stutz, Daniel I. Bolnick

tropiTree: An NGS-Based EST-SSR Resource for 24 Tropical Tree Species

Joanne R. Russell, Peter E. Hedley, [ ... ], Ian K. Dawson

An Integrated SNP Mining and Utilization (ISMU) Pipeline for Next Generation Sequencing Data

Sarwar Azam, Abhishek Rathore, [ ... ], Rajeev K. Varshney

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