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Next-generation sequencing

No evidence of genome editing activity from Natronobacterium gregoryi Argonaute (NgAgo) in human cells

Parisa Javidi-Parsijani, Guoguang Niu, Meghan Davis, Pin Lu, Anthony Atala, Baisong Lu

published 11 May 2017

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Pathogenic variants screening in seventeen candidate genes on 2p15 for association with ankylosing spondylitis in a Han Chinese population

Mengmeng Wang, Lihong Xin, Guoqi Cai, Xu Zhang, Xiao Yang, Xiaona Li, Qing Xia, Li Wang, Shengqian Xu, Jianhua Xu, Zongwen Shuai, Changhai Ding, Faming Pan

published 11 May 2017

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Revising mtDNA haplotypes of the ancient Hungarian conquerors with next generation sequencing

Endre Neparáczki, Klaudia Kocsy, Gábor Endre Tóth, Zoltán Maróti, Tibor Kalmár, Péter Bihari, István Nagy, György Pálfi, Erika Molnár, István Raskó, Tibor Török

published 19 Apr 2017

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Mutational spectrum of Chinese LGMD patients by targeted next-generation sequencing

Meng Yu, Yiming Zheng, Suqin Jin, Qiang Gang, Qingqing Wang, Peng Yu, He Lv, Wei Zhang, Yun Yuan, Zhaoxia Wang

published 12 Apr 2017

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Mobile Genome Express (MGE): A comprehensive automatic genetic analyses pipeline with a mobile device

Jun-Hee Yoon, Thomas W. Kim, Pedro Mendez, David M. Jablons, Il-Jin Kim

published 12 Apr 2017

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Deep sequencing is an appropriate tool for the selection of unique Hepatitis C virus (HCV) variants after single genomic amplification

Thibault Guinoiseau, Alain Moreau, Guillaume Hohnadel, Nicole Ngo-Giang-Huong, Celine Brulard, Patrick Vourc’h, Alain Goudeau, Catherine Gaudy-Graffin

published 31 Mar 2017

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Halvade-RNA: Parallel variant calling from transcriptomic data using MapReduce

Dries Decap, Joke Reumers, Charlotte Herzeel, Pascal Costanza, Jan Fostier

published 30 Mar 2017

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Opening the treasure chest: A DNA-barcoding primer set for most higher taxa of Central European birds and mammals from museum collections

Sylvia Schäffer, Frank E. Zachos, Stephan Koblmüller

published 30 Mar 2017

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Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae

Margarita Ros, Iulia Raut, Ana Belén Santisima-Trinidad, Jose Antonio Pascual

published 27 Mar 2017

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GLM-based optimization of NGS data analysis: A case study of Roche 454, Ion Torrent PGM and Illumina NextSeq sequencing data

Sarah Sandmann, Aniek O. de Graaf, Bert A. van der Reijden, Joop H. Jansen, Martin Dugas

published 21 Feb 2017

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High-quality RNA extraction from the sea urchin Paracentrotus lividus embryos

Nadia Ruocco, Susan Costantini, Valerio Zupo, Giovanna Romano, Adrianna Ianora, Angelo Fontana, Maria Costantini

published 15 Feb 2017

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Error baseline rates of five sample preparation methods used to characterize RNA virus populations

Jeffrey R. Kugelman, Michael R. Wiley, Elyse R. Nagle, Daniel Reyes, Brad P. Pfeffer, Jens H. Kuhn, Mariano Sanchez-Lockhart, Gustavo F. Palacios

published 09 Feb 2017

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Highly sensitive detection of a HER2 12-base pair duplicated insertion mutation in lung cancer using the Eprobe-PCR method

Yoshiaki Takase, Kengo Usui, Kimihiro Shimizu, Yasumasa Kimura, Tatsuo Ichihara, Takahiro Ohkawa, Jun Atsumi, Yasuaki Enokida, Seshiru Nakazawa, Kai Obayashi, Yoichi Ohtaki, Toshiteru Nagashima, Yasumasa Mitani, Izumi Takeyoshi

published 02 Feb 2017

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