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Next-generation sequencing

Systematic Comparison of Three Methods for Fragmentation of Long-Range PCR Products for Next Generation Sequencing

Ellen Knierim, Barbara Lucke, [ ... ], Dominik Seelow

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

Dylan P. Smith, Kabir G. Peay

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, [ ... ], Donald J. Baird

Variant Callers for Next-Generation Sequencing Data: A Comparison Study

Xiangtao Liu, Shizhong Han, [ ... ], Bao-Zhu Yang

Compression of FASTQ and SAM Format Sequencing Data

James K. Bonfield, Matthew V. Mahoney

Probing the SELEX Process with Next-Generation Sequencing

Tatjana Schütze, Barbara Wilhelm, [ ... ], Jörn Glökler

Comparative Evaluation of DNA Extraction Methods from Feces of Multiple Host Species for Downstream Next-Generation Sequencing

Marcia L. Hart, Alexandra Meyer, Philip J. Johnson, Aaron C. Ericsson

Next-Generation Phage Display: Integrating and Comparing Available Molecular Tools to Enable Cost-Effective High-Throughput Analysis

Emmanuel Dias-Neto, Diana N. Nunes, [ ... ], Wadih Arap

VirusFinder: Software for Efficient and Accurate Detection of Viruses and Their Integration Sites in Host Genomes through Next Generation Sequencing Data

Qingguo Wang, Peilin Jia, Zhongming Zhao

Somatic Mutation Profiles of MSI and MSS Colorectal Cancer Identified by Whole Exome Next Generation Sequencing and Bioinformatics Analysis

Bernd Timmermann, Martin Kerick, [ ... ], Michal R. Schweiger

Next-Generation Sequencing Reveals Significant Bacterial Diversity of Botrytized Wine

Nicholas A. Bokulich, C. M. Lucy Joseph, [ ... ], David A. Mills

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

Identification of Optimum Sequencing Depth Especially for De Novo Genome Assembly of Small Genomes Using Next Generation Sequencing Data

Aarti Desai, Veer Singh Marwah, [ ... ], Abhay Jere

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