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Next-generation sequencing

Species-specific regulation of angiogenesis by glucocorticoids reveals contrasting effects on inflammatory and angiogenic pathways

Ruth Morgan, John Keen, Daniel Halligan, Alan O’Callaghan, Ruth Andrew, Dawn Livingstone, Amber Abernethie, Giorgia Maltese, Brian Walker, Patrick Hadoke

published 15 Feb 2018

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Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

Christiane Schaefer, Nikhil Mallela, Jochen Seggewiß, Birgit Lechtape, Heymut Omran, Uta Dirksen, Eberhard Korsching, Jenny Potratz

published 31 Jan 2018

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Aptamers as biomarkers for neurological disorders. Proof of concept in transgenic mice

Soizic Lecocq, Katia Spinella, Bruno Dubois, Simone Lista, Harald Hampel, Gregory Penner

published 05 Jan 2018

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Gaussian decomposition of high-resolution melt curve derivatives for measuring genome-editing efficiency

Michail Zaboikin, Carl Freter, Narasimhachar Srinivasakumar

published 04 Jan 2018

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HIV-1 envelope sequence-based diversity measures for identifying recent infections

Alexis Kafando, Eric Fournier, Bouchra Serhir, Christine Martineau, Florence Doualla-Bell, Mohamed Ndongo Sangaré, Mohamed Sylla, Annie Chamberland, Mohamed El-Far, Hugues Charest, Cécile L. Tremblay

published 28 Dec 2017

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Characteristics of percutaneous core biopsies adequate for next generation genomic sequencing

Sharjeel H. Sabir, Savitri Krishnamurthy, Sanjay Gupta, Gordon B. Mills, Wei Wei, Andrea C. Cortes, Kenna R. Mills Shaw, Rajyalakshmi Luthra, Michael J. Wallace

published 27 Dec 2017

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Targeted next-generation sequencing provides novel clues for associated epilepsy and cardiac conduction disorder/SUDEP

Monica Coll, Pasquale Striano, Carles Ferrer-Costa, Oscar Campuzano, Jesús Matés, Bernat del Olmo, Anna Iglesias, Alexandra Pérez-Serra, Irene Mademont, Ferran Picó, Antonio Oliva, Ramon Brugada

published 19 Dec 2017

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Single molecule sequencing of the M13 virus genome without amplification

Luyang Zhao, Liwei Deng, Gailing Li, Huan Jin, Jinsen Cai, Huan Shang, Yan Li, Haomin Wu, Weibin Xu, Lidong Zeng, Renli Zhang, Huan Zhao, Ping Wu, Zhiliang Zhou, Jiao Zheng, Pierre Ezanno, Andrew X. Yang, Qin Yan, Michael W. Deem, Jiankui He

published 18 Dec 2017

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Merging FT-IR and NGS for simultaneous phenotypic and genotypic identification of pathogenic Candida species

Claudia Colabella, Laura Corte, Luca Roscini, Volha Shapaval, Achim Kohler, Valeria Tafintseva, Carlo Tascini, Gianluigi Cardinali

published 04 Dec 2017

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Molecular diagnosis of patients with epilepsy and developmental delay using a customized panel of epilepsy genes

Laura Ortega-Moreno, Beatriz G. Giráldez, Victor Soto-Insuga, Rebeca Losada-Del Pozo, María Rodrigo-Moreno, Cristina Alarcón-Morcillo, Gema Sánchez-Martín, Esther Díaz-Gómez, Rosa Guerrero-López, José M. Serratosa, Grupo Español de Genética de las Epilepsias de la Infancia (GEGEI)

published 30 Nov 2017

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Classical and next generation sequencing approaches unravel Bymovirus diversity in barley crops in France

Mathieu Rolland, Julie Villemot, Armelle Marais, Sébastien Theil, Chantal Faure, Valérie Cadot, Romain Valade, Cindy Vitry, Frank Rabenstein, Thierry Candresse

published 28 Nov 2017

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BRCA1 and BRCA2 mutational profile and prevalence in hereditary breast and ovarian cancer (HBOC) probands from Southern Brazil: Are international testing criteria appropriate for this specific population?

Bárbara Alemar, Cleandra Gregório, Josef Herzog, Camila Matzenbacher Bittar, Cristina Brinckmann Oliveira Netto, Osvaldo Artigalas, Ida Vanessa D. Schwartz, Jordy Coffa, Suzi Alves Camey, Jeffrey Weitzel, Patricia Ashton-Prolla

published 21 Nov 2017

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Molecular characterization of novel mosquito-borne Rickettsia spp. from mosquitoes collected at the Demilitarized Zone of the Republic of Korea

Alice N. Maina, Terry A. Klein, Heung-Chul Kim, Sung-Tae Chong, Yu Yang, Kristin Mullins, Ju Jiang, Heidi St. John, Richard G. Jarman, Jun Hang, Allen L. Richards

published 20 Nov 2017

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