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Next-generation sequencing

ConDeTri - A Content Dependent Read Trimmer for Illumina Data

Linnéa Smeds, Axel Künstner

A Next-Generation Sequencing Data Analysis Pipeline for Detecting Unknown Pathogens from Mixed Clinical Samples and Revealing Their Genetic Diversity

Yu-Nong Gong, Guang-Wu Chen, [ ... ], Kuo-Chien Tsao

Fragmentation Through Polymerization (FTP): A new method to fragment DNA for next-generation sequencing

Konstantin B. Ignatov, Konstantin A. Blagodatskikh, [ ... ], Vladimir M. Kramarov

Leveraging the Power of High Performance Computing for Next Generation Sequencing Data Analysis: Tricks and Twists from a High Throughput Exome Workflow

Amit Kawalia, Susanne Motameny, [ ... ], Peter Nürnberg

Improved DOP-PCR (iDOP-PCR): A robust and simple WGA method for efficient amplification of low copy number genomic DNA

Konstantin A. Blagodatskikh, Vladimir M. Kramarov, [ ... ], Konstantin B. Ignatov

Chromosomal Instability Estimation Based on Next Generation Sequencing and Single Cell Genome Wide Copy Number Variation Analysis

Stephanie B. Greene, Angel E. Dago, [ ... ], Mark Landers

Mitogenomic Phylogenetics of Fin Whales (Balaenoptera physalus spp.): Genetic Evidence for Revision of Subspecies

Frederick I. Archer, Phillip A. Morin, [ ... ], Barbara L. Taylor

Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

Christiane Schaefer, Nikhil Mallela, [ ... ], Jenny Potratz

Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius

Marino Marinković, Wim C. de Leeuw, [ ... ], Martijs J. Jonker

Detection of Low-Level Mixed-Population Drug Resistance in Mycobacterium tuberculosis Using High Fidelity Amplicon Sequencing

Rebecca E. Colman, James M. Schupp, [ ... ], David M. Engelthaler

Comprehensive Maturity Onset Diabetes of the Young (MODY) Gene Screening in Pregnant Women with Diabetes in India

Mahesh Doddabelavangala Mruthyunjaya, Aaron Chapla, [ ... ], Nihal Thomas

A Deletion in the Bovine FANCI Gene Compromises Fertility by Causing Fetal Death and Brachyspina

Carole Charlier, Jorgen Steen Agerholm, [ ... ], Merete Fredholm

Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data

Bo-Young Kim, Jung Hoon Park, [ ... ], Mi-Hyun Park

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