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Network analysis

Fine-Tuning Enhancer Models to Predict Transcriptional Targets across Multiple Genomes

Stein Aerts, Jacques van Helden, Olivier Sand, Bassem A. Hassan

Identification and Classification of Hubs in Brain Networks

Olaf Sporns, Christopher J. Honey, Rolf Kötter

An Improved, Bias-Reduced Probabilistic Functional Gene Network of Baker's Yeast, Saccharomyces cerevisiae

Insuk Lee, Zhihua Li, Edward M. Marcotte

Direct Selection on Genetic Robustness Revealed in the Yeast Transcriptome

Stephen R. Proulx, Sergey Nuzhdin, Daniel E. L. Promislow

Metabolome Based Reaction Graphs of M. tuberculosis and M. leprae: A Comparative Network Analysis

Ketki D. Verkhedkar, Karthik Raman, Nagasuma R. Chandra, Saraswathi Vishveshwara

The Tricarboxylic Acid Cycle, an Ancient Metabolic Network with a Novel Twist

Ryan J. Mailloux, Robin Bériault, [ ... ], Vasu D. Appanna

Directed Cortical Information Flow during Human Object Recognition: Analyzing Induced EEG Gamma-Band Responses in Brain's Source Space

Gernot G. Supp, Alois Schlögl, [ ... ], Thomas Gruber

The Cis-regulatory Logic of the Mammalian Photoreceptor Transcriptional Network

Timothy H.-C. Hsiau, Claudiu Diaconu, [ ... ], Joseph C. Corbo

Robustness and Stability of the Gene Regulatory Network Involved in DV Boundary Formation in the Drosophila Wing

Javier Buceta, Héctor Herranz, [ ... ], Marco Milán

Mapping Human Whole-Brain Structural Networks with Diffusion MRI

Patric Hagmann, Maciej Kurant, [ ... ], Jean-Philippe Thiran

Indeterminacy of Reverse Engineering of Gene Regulatory Networks: The Curse of Gene Elasticity

Arun Krishnan, Alessandro Giuliani, Masaru Tomita

Selective Control of the Apoptosis Signaling Network in Heterogeneous Cell Populations

Diego Calzolari, Giovanni Paternostro, [ ... ], Phillip M. Duxbury

Meiotic Transmission of Drosophila pseudoobscura Chromosomal Arrangements

Richard P. Meisel, Stephen W. Schaeffer

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