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Natural language processing

Identification of Adverse Drug Events from Free Text Electronic Patient Records and Information in a Large Mental Health Case Register

Ehtesham Iqbal, Robbie Mallah, [ ... ], Richard J. B. Dobson

pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature

Ruoyao Ding, Cecilia N. Arighi, [ ... ], K. Vijay-Shanker

Assessing the Impact of Case Sensitivity and Term Information Gain on Biomedical Concept Recognition

Tudor Groza, Karin Verspoor

Generation of Silver Standard Concept Annotations from Biomedical Texts with Special Relevance to Phenotypes

Anika Oellrich, Nigel Collier, Damian Smedley, Tudor Groza

Using Information from the Electronic Health Record to Improve Measurement of Unemployment in Service Members and Veterans with mTBI and Post-Deployment Stress

Christina Dillahunt-Aspillaga, Dezon Finch, [ ... ], James A. McCart

A Machine Reading System for Assembling Synthetic Paleontological Databases

Shanan E. Peters, Ce Zhang, Miron Livny, Christopher Ré

Negation’s Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing

Stephen Wu, Timothy Miller, [ ... ], Cheryl Clark

Anatomical Entity Recognition with a Hierarchical Framework Augmented by External Resources

Yan Xu, Ji Hua, [ ... ], Junichi Tsujii

ClinicalTrials.gov as a Data Source for Semi-Automated Point-Of-Care Trial Eligibility Screening

Pascal B. Pfiffner, JiWon Oh, Timothy A. Miller, Kenneth D. Mandl

Facilitating Surveillance of Pulmonary Invasive Mold Diseases in Patients with Haematological Malignancies by Screening Computed Tomography Reports Using Natural Language Processing

Michelle R. Ananda-Rajah, David Martinez, [ ... ], Karin A. Thursky

Predicting Co-Author Relationship in Medical Co-Authorship Networks

Qi Yu, Chao Long, [ ... ], Zhiguang Duan

Automatic Extraction of Nanoparticle Properties Using Natural Language Processing: NanoSifter an Application to Acquire PAMAM Dendrimer Properties

David E. Jones, Sean Igo, John Hurdle, Julio C. Facelli

A Multistage Gene Normalization System Integrating Multiple Effective Methods

Lishuang Li, Shanshan Liu, [ ... ], Huiwei Zhou

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