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Multiple alignment calculation

Design Pattern Mining Using Distributed Learning Automata and DNA Sequence Alignment

Mansour Esmaeilpour, Vahideh Naderifar, Zarina Shukur

Recombination Pattern Reanalysis of Some HIV-1 Circulating Recombination Forms Suggest the Necessity and Difficulty of Revision

Lei Jia, Lin Li, [ ... ], Jingyun Li

Comparative Analysis of Functional Metagenomic Annotation and the Mappability of Short Reads

Rogan Carr, Elhanan Borenstein

Profile Hidden Markov Models for the Detection of Viruses within Metagenomic Sequence Data

Peter Skewes-Cox, Thomas J. Sharpton, Katherine S. Pollard, Joseph L. DeRisi

Molecular Dynamics Study of Binding of µ-Conotoxin GIIIA to the Voltage-Gated Sodium Channel Na_v1.4

Somayeh Mahdavi, Serdar Kuyucak

Characterization of Hepatitis C Virus Genotypes by Direct Sequencing of HCV 5′UTR Region of Isolates from Saudi Arabia

Medhat K. Shier, Mohammad S. El-Wetidy, Hebatallah H. Ali, Mohammad M. Al-Qattan

JAGuaR: Junction Alignments to Genome for RNA-Seq Reads

Yaron S. Butterfield, Maayan Kreitzman, [ ... ], İnanç Birol

Some Limitations of Public Sequence Data for Phylogenetic Inference (in Plants)

Cody E. Hinchliff, Stephen Andrew Smith

Systematic Characterization and Comparative Analysis of the Rabbit Immunoglobulin Repertoire

Jason J. Lavinder, Kam Hon Hoi, [ ... ], George Georgiou

GASOLINE: a Greedy And Stochastic algorithm for Optimal Local multiple alignment of Interaction NEtworks

Giovanni Micale, Alfredo Pulvirenti, Rosalba Giugno, Alfredo Ferro

Identification of Divergent Protein Domains by Combining HMM-HMM Comparisons and Co-Occurrence Detection

Amel Ghouila, Isabelle Florent, [ ... ], Laurent Bréhélin

RNAbrowse: RNA-Seq De Novo Assembly Results Browser

Jérôme Mariette, Céline Noirot, [ ... ], Christophe Klopp

Redefining the PF06864 Pfam Family Based on Burkholderia pseudomallei PilO2_Bp S-SAD Crystal Structure

Patricia Lassaux, Oscar Conchillo-Solé, [ ... ], Martino Bolognesi

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