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Microbiome

ACMTF-R: Supervised multi-omics data integration uncovering shared and distinct outcome-associated variation

Geert Roelof van der Ploeg, Fred T. G. White, Rasmus Riemer Jakobsen, Johan A. Westerhuis, Anna Heintz-Buschart, Age K. Smilde

published 12 Jan 2026

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Exploring the relationships between the gut microbiome composition and movement patterns of laying hens in a multitier cage-free housing system

Anaïs Cazals, Sabine Gebhardt-Henrich, Quentin Berger, Marie-Noëlle Rossignol, Deborah Jardet, Michael J. Toscano, Tatiana Zerjal

published 09 Jan 2026

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Fecal butyrate and deoxycholic acid quantitation for rapid assessment of the gut microbiome

Michael W. Mullowney, Angelica Moran, Antonio Hernandez, Mary McMillin, Amber R. Rose, David Moran, Jessica Little, Ann B. Nguyen, Bhakti K. Patel, Christopher J. Lehmann, Matthew A. Odenwald, Eric G. Pamer, Kiang-Teck J. Yeo, Ashley M. Sidebottom

published 09 Jan 2026

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High microbial diversity in glacial habitats uncoupled from the specialized microbiomes of resident chironomid fauna

Valeria Lencioni, Alessandra Tondello, Isabel Martinez-Sañudo, Saptarathi Deb, Lucia Giagnoni, Augusto Zanella, Giuseppe Concheri, Piergiorgio Stevanato, Luca Mazzon, Andrea Squartini

published 08 Jan 2026

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Microbial profile along the maternal-infant axis: Early characterization and relationships in breastfeeding women and their newborns in a Colombian population

Diana Carolina Londoño-Sierra, Claudia Jaramillo-Mazo, Shadia Blel, Victoria Mesa, Sandra Lucia Restrepo-Mesa, Julián Paul Martínez Galán, Laura Sierra-Zapata

published 08 Jan 2026

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Soil microbiome perturbation impedes growth of Bouteloua curtipendula and increases relative abundance of soil microbial pathogens

Alisiara Hobbs, Daisy Ochoa-Rojas, Christine E. Humphrey, John A. Kyndt, Tyler C. Moore

published 05 Jan 2026

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Exploring gut microbiome and nutritional status among children with Autism Spectrum Disorder (MY-ASD Microbiome): A study protocol

Kai Xuan Wong, Seong Ting Chen, Jun Jean Ong, Wan Ying Gan, Nor Azian Abdul Murad, Chun Wie Chong, Nurul Hanis Ramzi

published 31 Dec 2025

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Assessment of the midgut microbiota in foragers of the stingless bee Melipona scutellaris following short-term sublethal exposure to imidacloprid

Patricia Azevedo, Lucas Miotelo, Manuela Oliveira Ramalho, Tatiane Caroline Grella, Osmar Malaspina, Matthew Hudson, Roberta Cornélio Ferreira Nocelli, Maria Imaculada Zucchi

published 29 Dec 2025

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The relationships between box turtle gut microbiomes and personality

Kaija Harlow, Elizabeth K. Service, Jace E. Geiger, Bradley E. Carlson, Steven J.A. Kimble

published 19 Dec 2025

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Effects of risperidone on amino acid metabolism, glucose, and kidney function in healthy adults: A pilot randomized controlled trial

Megumi Oshima, Tadashi Toyama, Yusuke Nakade, Sakae Miyagi, Hisayuki Ogura, Shiori Nakagawa, Takahiro Yuasa, Akihiko Koshino, Keisuke Horikoshi, Taichiro Minami, Keisuke Sako, Shunsuke Tsuge, Akira Tamai, Ryo Nishioka, Taro Miyagawa, Kiyoaki Ito, Shinji Kitajima, Ichiro Mizushima, Akinori Hara, Norihiko Sakai, Miho Shimizu, Toshiaki Tokumaru, Makoto Tsubomoto, Mitsuru Kikuchi, Masashi Kinoshita, Mitsutoshi Nakada, Masashi Mita, Yasunori Iwata, Takashi Wada

published 05 Dec 2025

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SARS-CoV-2 detection is independent of microbiome composition on surfaces in a major Ontario hospital

Nikhil A. George, Lauren Bradford, Aaron Hinz, Marita El Kadi, Lydia Xing, Evgueni Doukhanine, Derek R. MacFadden, Caroline Nott, Michael Fralick, Rees Kassen, Alex Wong, Laura A. Hug

published 04 Dec 2025

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A reliable in vitro rumen culture system and workflow for screening anti-methanogenic compounds

Philip P. Laric, Armina Mortazavi, Ewa Węgrzyn, Kathrin Simon, Pauline S. Rittel, Florian M. Trefz, Benedikt Sabass

published 01 Dec 2025

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Cecal microbiota of broilers responds similarly to black soldier fly larvae fat and conventional dietary fat sources

Muhammad Rumman Aslam, Bartosz Kierończyk, Piotr Szymkowiak, Liliana Ciesielska, Mateusz Rawski, Robert Mikuła, Damian Józefiak

published 25 Nov 2025

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