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Microbiome

Identifying Keystone Species in the Human Gut Microbiome from Metagenomic Timeseries Using Sparse Linear Regression

Charles K. Fisher, Pankaj Mehta

The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes

Mark W. J. van Passel, Ravi Kant, [ ... ], Hauke Smidt

Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples

Dana Willner, Joshua Daly, [ ... ], Philip Hugenholtz

Filthy lucre: A metagenomic pilot study of microbes found on circulating currency in New York City

Julia M. Maritz, Steven A. Sullivan, [ ... ], Jane M. Carlton

Dynamic Gut Microbiome across Life History of the Malaria Mosquito Anopheles gambiae in Kenya

Ying Wang, Thomas M. Gilbreath III, [ ... ], Jiannong Xu

Deep Sequencing Identifies Ethnicity-Specific Bacterial Signatures in the Oral Microbiome

Matthew R. Mason, Haikady N. Nagaraja, [ ... ], Purnima S. Kumar

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

Max E. Winston, Jarrad Hampton-Marcell, [ ... ], S. M. Gibbons

Novel Bacterial Taxa in the Human Microbiome

Kristine M. Wylie, Rebecca M. Truty, [ ... ], Katherine S. Pollard

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis

Adam G. Clooney, Fiona Fouhy, [ ... ], Marcus J. Claesson

The human microbiome and COVID-19: A systematic review

Shinya Yamamoto, Makoto Saito, [ ... ], Hiroshi Yotsuyanagi

Insights from Characterizing Extinct Human Gut Microbiomes

Raul Y. Tito, Dan Knights, [ ... ], Cecil M. Lewis Jr

Bacterial Communities in Semen from Men of Infertile Couples: Metagenomic Sequencing Reveals Relationships of Seminal Microbiota to Semen Quality

Shun-Long Weng, Chih-Min Chiu, [ ... ], Hsien-Da Huang

Microbiota Dynamics in Patients Treated with Fecal Microbiota Transplantation for Recurrent Clostridium difficile Infection

Yang Song, Shashank Garg, [ ... ], W. Florian Fricke

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