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Microbiome

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes

published 22 Apr 2013

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Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) Allelic Variants Relate to Shifts in Faecal Microbiota of Cystic Fibrosis Patients

Serena Schippa, Valerio Iebba, Floriana Santangelo, Antonella Gagliardi, Riccardo Valerio De Biase, Antonella Stamato, Serenella Bertasi, Marco Lucarelli, Maria Pia Conte, Serena Quattrucci

published 17 Apr 2013

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A 454 Survey Reveals the Community Composition and Core Microbiome of the Common Bed Bug (Cimex lectularius) across an Urban Landscape

Matthew Meriweather, Sara Matthews, Rita Rio, Regina S. Baucom

published 09 Apr 2013

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Composition of the Vaginal Microbiota in Women of Reproductive Age – Sensitive and Specific Molecular Diagnosis of Bacterial Vaginosis Is Possible?

Elena Shipitsyna, Annika Roos, Raluca Datcu, Anders Hallén, Hans Fredlund, Jørgen S. Jensen, Lars Engstrand, Magnus Unemo

published 09 Apr 2013

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Human Breath Analysis May Support the Existence of Individual Metabolic Phenotypes

Pablo Martinez-Lozano Sinues, Malcolm Kohler, Renato Zenobi

published 03 Apr 2013

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Modulation of the Metabiome by Rifaximin in Patients with Cirrhosis and Minimal Hepatic Encephalopathy

Jasmohan S. Bajaj, Douglas M. Heuman, Arun J. Sanyal, Phillip B. Hylemon, Richard K. Sterling, R. Todd Stravitz, Michael Fuchs, Jason M. Ridlon, Kalyani Daita, Pamela Monteith, Nicole A. Noble, Melanie B. White, Andmorgan Fisher, Masoumeh Sikaroodi, Huzefa Rangwala, Patrick M. Gillevet

published 02 Apr 2013

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Diversity and Abundance of the Bacterial Community of the Red Macroalga Porphyra umbilicalis: Did Bacterial Farmers Produce Macroalgae?

Lilibeth N. Miranda, Keith Hutchison, Arthur R. Grossman, Susan H. Brawley

published 20 Mar 2013

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The Dental Plaque Microbiome in Health and Disease

Scott N. Peterson, Erik Snesrud, Jia Liu, Ana C. Ong, Mogens Kilian, Nicholas J. Schork, Walter Bretz

published 08 Mar 2013

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Detection of Transient Bacteraemia following Dental Extractions by 16S rDNA Pyrosequencing: A Pilot Study

Alfonso Benítez-Páez, Maximiliano Álvarez, Pedro Belda-Ferre, Susana Rubido, Alex Mira, Inmaculada Tomás

published 04 Mar 2013

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The Poultry-Associated Microbiome: Network Analysis and Farm-to-Fork Characterizations

Brian B. Oakley, Cesar A. Morales, J. Line, Mark E. Berrang, Richard J. Meinersmann, Glenn E. Tillman, Mark G. Wise, Gregory R. Siragusa, Kelli L. Hiett, Bruce S. Seal

published 27 Feb 2013

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Molecular Mapping to Species Level of the Tonsillar Crypt Microbiota Associated with Health and Recurrent Tonsillitis

Anders Jensen, Helena Fagö-Olsen, Christian Hjort Sørensen, Mogens Kilian

published 21 Feb 2013

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Exploring the Dynamic Core Microbiome of Plaque Microbiota during Head-and-Neck Radiotherapy Using Pyrosequencing

Yue-jian Hu, Zi-yang Shao, Qian Wang, Yun-tao Jiang, Rui Ma, Zi-sheng Tang, Zheng Liu, Jing-ping Liang, Zheng-wei Huang

published 21 Feb 2013

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Cellulose Supplementation Early in Life Ameliorates Colitis in Adult Mice

Dorottya Nagy-Szakal, Emily B. Hollister, Ruth Ann Luna, Reka Szigeti, Nina Tatevian, C. Wayne Smith, James Versalovic, Richard Kellermayer

published 20 Feb 2013

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