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Microbial taxonomy

Uncovering the hidden yeast diversity in fermented coffee: Insights from a shotgun metagenomic approach

Katherine Bedoya-Urrego, Aida Esther Peñuela-Martínez, Juan F. Alzate

published 19 Feb 2026

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Beyond the host: Unveiling the independent microbiome of equine gastrointestinal nematodes

Fabio Gentilini, Tolulope Grace Ogundipe, Maria Elena Turba, Noemi Romagnoli, Carlotta Lambertini, Claudia Pollera, Paola Cremonesi, Laura Stancampiano

published 10 Feb 2026

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Bacterial-archaeal co-occurrence in honey bee gut microbiomes across host species and management regimes

Jian-Ping Ying, Yang-Feng Zou, Tao Jiang, Jia-Li Chang

published 21 Jan 2026

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Evaluation of the soil microbiome of three raised beaches in the Devon Island Lowland, High Arctic, Canada

Laura Maretto, Saptarathi Deb, Andrea Squartini, Giuseppe Concheri, Piergiorgio Stevanato, Serenella Nardi, Stefania Cocco, Giuseppe Corti

published 05 Nov 2025

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Exploring extreme environments in Türkiye for novel P450s through metagenomic analysis

Hande Mumcu, Julian Zaugg, Irem Keles, Aycan Kayrav, Nurgul Balci, David R. Nelson, Philip Hugenholtz, Elizabeth M. J. Gillam, Nevin Gul Karaguler

published 08 Sep 2025

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Metagenomic profiling of the insect-specific virome in non-urban mosquitoes (Culicidae: Culicinae) from Colombia’s Northern inter-Andean valleys

Andrés Gómez-Palacio, Howard Junca, Rafael J. Vivero-Gomez, Juan Suaza, Claudia X. Moreno-Herrera, Gloria Cadavid-Restrepo, Dietmar H. Pieper, Sandra Uribe

published 03 Sep 2025

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Evaluation of shotgun metagenomics as a diagnostic tool for infectious gastroenteritis

Kjersti Haugum, Anuradha Ravi, Jan Egil Afset, Christina Gabrielsen Ås

published 02 Sep 2025

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Stabilized and unstabilized sampling methods result in differential fecal 16S rRNA microbial sequencing results

Christopher E. Stamper, Andrew J. Hoisington, Joseph C. Ellis, Christopher A. Lowry, Lisa A. Brenner

published 13 Aug 2025

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Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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Microbiota and Postmenopause: The resilience of intestinal bacteria in the face of female hormonal aging

Thayane Christine Alves da Silva, Jennefer Aparecida Gonçalves Oliveira, Lauro Ângelo Gonçalves de Moraes, Izinara Rosse, Aristóteles Góes-Neto, Vasco Ariston de Carvalho Azevedo, Renata Guerra-Sá

published 18 Jun 2025

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Impact of predicted microbiota tryptophanase activity on Cryptosporidium parvum proliferation

Debora Regina Romualdo da Silva, Xiaojiao Yang, Giovanni Widmer

published 13 Jun 2025

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Beneficial effect of consuming milk containing only A2 beta-casein on gut microbiota: A single-center, randomized, double-blind, cross-over study

Chin-Hee Song, Nayoung Kim, Yonghoon Choi, Seulgi Kim, Kyung Su Kim, Min Hee Park, Sang Hee Lee, Dong Ho Lee

published 08 May 2025

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In vivo assessment of the effect of gel containing lactic acid and glycogen on vaginal microbiota and pH of asymptomatic women of reproductive age

Adriana Bittencourt Campaner, Ana Carolina Alves Rosário Sica, Flavia Salomão d’ Avila Curi, Giulia Marchetti, Grazielle Suhett Dias, Bianca Luise Teixeira

published 24 Apr 2025

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