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Microbial taxonomy

Shotgun metagenomic analysis of saliva microbiome suggests Mogibacterium as a factor associated with chronic bacterial osteomyelitis

Hiroko Yahara, Souichi Yanamoto, [ ... ], Koji Yahara

Host influence on the eukaryotic virome of sympatric mosquitoes and abundance of diverse viruses with a broad host range

Côme Morel, Patricia Gil, [ ... ], Serafin Gutierrez

Detection of pathogenic bacteria in ticks from Isiolo and Kwale counties of Kenya using metagenomics

Bryson Brian Kimemia, Lillian Musila, [ ... ], Fredrick Eyase

Exploring the interplay between the core microbiota, physicochemical factors, agrobiochemical cycles in the soil of the historic tokaj mád wine region

Judit Remenyik, László Csige, [ ... ], Melinda Paholcsek

Bacterial diversity and composition on the rinds of specific melon cultivars and hybrids from across different growing regions in the United States

Madison Goforth, Victoria Obergh, [ ... ], Kerry K. Cooper

Gradients of bacteria in the oceanic water column reveal finely-resolved vertical distributions

Rachel C. Harbeitner, Fabian Wittmers, [ ... ], Alexandra Z. Worden

Investigating the relationship between microbial network features of giant kelp “seedbank” cultures and subsequent farm performance

Melisa G. Osborne, Ariel Levi Simons, [ ... ], Sergey V. Nuzhdin

Speeding genomic island discovery through systematic design of reference database composition

Steven L. Yu, Catherine M. Mageeney, [ ... ], Kelly P. Williams

The salivary microbiota of patients with acute lower respiratory tract infection–A multicenter cohort study

Matthew B. Rogers, Ashley Harner, [ ... ], David T. Huang

Diversity and spatiotemporal variations in bacterial and archaeal communities within Kuwaiti territorial waters of the Northwest Arabian Gulf

Saja A. Fakhraldeen, Sakinah Al-Haddad, [ ... ], Walid M. Al-Zakri

Integrating current analyses of the breast cancer microbiome

Sidra Sohail, Michael B. Burns

MT-MAG: Accurate and interpretable machine learning for complete or partial taxonomic assignments of metagenome-assembled genomes

Wanxin Li, Lila Kari, Yaoliang Yu, Laura A. Hug

The selection of software and database for metagenomics sequence analysis impacts the outcome of microbial profiling and pathogen detection

Ruijie Xu, Sreekumari Rajeev, Liliana C. M. Salvador

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