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Microbial taxonomy

Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

Lucie Zinger, Linda A. Amaral-Zettler, [ ... ], Alban Ramette

The Phylogenetic Diversity of Metagenomes

Steven W. Kembel, Jonathan A. Eisen, Katherine S. Pollard, Jessica L. Green

Culture Enriched Molecular Profiling of the Cystic Fibrosis Airway Microbiome

Christopher D. Sibley, Margot E. Grinwis, [ ... ], Michael G. Surette

Microbial Diversity in the Midguts of Field and Lab-Reared Populations of the European Corn Borer Ostrinia nubilalis

Eugeni Belda, Laia Pedrola, [ ... ], Manuel Porcar

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, [ ... ], Eugene J. Leys

Core Gene Set As the Basis of Multilocus Sequence Analysis of the Subclass Actinobacteridae

Toïdi Adékambi, Ray W. Butler, [ ... ], Thomas M. Shinnick

Evolution of Bacterial Phosphoglycerate Mutases: Non-Homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers

Jeremy M. Foster, Paul J. Davis, [ ... ], Clotilde K. S. Carlow

Metagenomic Profiling of a Microbial Assemblage Associated with the California Mussel: A Node in Networks of Carbon and Nitrogen Cycling

Catherine A. Pfister, Folker Meyer, Dionysios A. Antonopoulos

Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-Specific Expression Patterns

John A. Craft, Jack A. Gilbert, [ ... ], J. Kevin Chipman

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

Marcus J. Claesson, Orla O'Sullivan, [ ... ], Paul W. O'Toole

An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP)

Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A. Eisen

Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

Tim Urich, Anders Lanzén, [ ... ], Stephan C. Schuster

Large-Scale Comparative Genomic Ranking of Taxonomically Restricted Genes (TRGs) in Bacterial and Archaeal Genomes

Gareth A. Wilson, Edward J. Feil, Andrew K. Lilley, Dawn Field

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